Author

Alexander Richter

University of California San Diego

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Organism:mouse· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Organism:human· 1

Frequent Co-Authors

Amir ZarrinpariD· 1 shared Arielle D. TrippiD· 1 shared Asako Tan· 1 shared Daniel M Ferrer· 1 shared Daniel S. WhittakeriD· 1 shared Dylan SkolaiD· 1 shared Erica S. MaissyiD· 1 shared Guillaume UrtechoiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperGenomics

Amir ZarrinparORCID

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2 papers

Recent·Most cited

Metagenome-scale Modeling to Assess Microbiome Metabolic Complementarity for Precision Microbiota Transplantation Therapies

Zetian Zhang, Mark Holton, Daniel M Ferrer, Arielle D. Tripp, Alexander Richter, Purushottam D. Dixit, Guillaume Urtecho

This paper develops a metagenome-scale metabolic model to predict FMT outcomes by assessing donor-recipient metabolic compatibility in IBS patients.

Gut Microbes · Sep 2, 2026Peer-reviewedMicrobiology

Optimizing mouse metatranscriptome profiling by selective removal of redundant nucleic acid sequences

Morgan Roos, Samuel Bunga, Asako Tan, Erica S. Maissy, Dylan Skola, Alexander Richter, Daniel S. Whittaker, Paula Desplats, Amir Zarrinpar, Rick Conrad, Scott Kuersten

The paper improves rRNA depletion for mouse cecal metatranscriptome analysis by designing probes based on sequence abundance rather than taxonomy, increasing mRNA reads and reducing bias.

mSystems · Jun 16, 2025Peer-reviewedGenomics