Author

Amy Chen

Carleton College

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Ecology· 2 Evolutionary Biology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:host-pathogen & immune response· 2 Approach:statistical model· 2 Approach:deep learning· 1 Research Focus:ecology & biodiversity· 1 Approach:genetic perturbation / CRISPR· 1 Organism:human· 1 Assay:metagenomics· 1

Frequent Co-Authors

Amanda K. HundiD· 3 shared Cate Patterson· 3 shared Daniel I. BolnickiD· 3 shared Emma S. ChoiiD· 3 shared Grace J. VaziriiD· 3 shared Gwen Casey· 3 shared Heather AlexanderiD· 3 shared Jessica L. HiteiD· 3 shared

Activity by Year

2026-2026 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersEcology

Amanda K. HundORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Angiopoietin-like protein 7 (ANGPTL7)-mediated effects on resident immune cells contribute to neurodegeneration in glaucomatous optic nerve head

Thomas R. Vollmer, Katie Dolan, Chuanxi Xiang, Angela Banks, Eileen M. Cooney, Jessica Heyder, Charles C. King, Joanna Vrouvlianis, Akshata N Gujar, Nathaniel D. Kirkpatrick, Xiaoqiu Wu, Carter Jones, Loren J. Miraglia, Anthony P. Orth, Yubin Qiu, , Christopher W. Wilson

This study shows ANGPTL7 affects immune cells in the optic nerve head, contributing to neurodegeneration in glaucoma, despite no effect on intraocular pressure.

bioRxiv · Oct 2, 2026 · PreprintNeuroscience

Constitutive and inducible fibrosis explain immune variation among threespine stickleback populations

Emma S. Choi, Ben A. Flanagan, Heather Alexander, John L. Berini, Alex Yeung, Cole J. Wolf, Viola R. Watts, Grace J. Vaziri, Nataly Vargas, Caroline Szajada, Penelope Steffen, Ipsita Srinivas, Mehreen Shahid, Ana Santacruz, Kaigula Rochon, , Amanda K. Hund

The paper investigates immune variation in threespine stickleback populations by analyzing fibrosis responses to parasites and environmental factors.

bioRxiv · Jul 23, 2026 · PreprintEvolutionary Biology

Linking land-use change, water quality, and host-parasite dynamics with droplet digital PCR and Bayesian path analyses

Ipsita Srinivas, Chloe A. Fouilloux, Eric C Neeno-Eckwall, Amy Chen, Shira Dubin, Cate Patterson, Gwen Casey, Emma S. Choi, Grace J. Vaziri, Heather Alexander, John L. Berini, Paul Orlando-Simoni, Daniel I. Bolnick, Amanda K. Hund, Jessica L. Hite

This study uses ddPCR and Bayesian path analysis to link land-use changes to parasite dynamics in freshwater ecosystems, finding a positive correlation between deforestation and copepod density.

bioRxiv · May 15, 2026 · PreprintEcology

A Multi-Scale Ecological Approach to Assessing Antimicrobial Resistance in a Freshwater Fish

John L. Berini, Chloe A. Fouilloux, Eric C Neeno-Eckwall, Heather Alexander, Emma S. Choi, Grace J. Vaziri, Jennifer McClure, Gwen Casey, Amy Chen, Shira Dubin, Cate Patterson, Amanda K. Hund, Daniel I. Bolnick, Jessica L. Hite

This study assesses antimicrobial resistance in freshwater fish by integrating molecular measurements with geospatial modeling to identify environmental factors linked to AMR gene distribution.

bioRxiv · May 11, 2026 · PreprintEcology