Author

Asres Berhan

University of California San Diego

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

Alessandra CastaldiiD· 1 shared Amy L. RyaniD· 1 shared Angela MeieriD· 1 shared Beiyun ZhouiD· 1 shared Ben A. Calvert· 1 shared Crystal N. MarconettiD· 1 shared Eugene M. GoltsiD· 1 shared Eun Kyu Sung· 1 shared

Activity by Year

2024-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Alessandra CastaldiORCID

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1 paper

Recent·Most cited

Integrated multiomic analysis identifies TRIP13 as a mediator of alveolar epithelial type II cell dysfunction in idiopathic pulmonary fibrosis

Laurence St. Pierre, Asres Berhan, Eun Kyu Sung, Juan R. Alvarez, Hongjun Wang, Yanbin Ji, Yixin Liu, Haoze Vincent Yu, Angela Meier, Kamyar Afshar, Eugene M. Golts, Grace Lin, Alessandra Castaldi, Ben A. Calvert, Amy L. Ryan, , Zea Borok

The paper identifies TRIP13 as a mediator of AT2 cell dysfunction in IPF through integrated transcriptomic and epigenomic analysis and shows TRIP13 inhibition prevents mesenchymal gene signature acquisition.

bioRxiv · Apr 5, 2024 · PreprintBioinformatics