Author

Baikang Pei

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Approach:experimental assay· 2 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:development & morphogenesis· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Alessandra BreschiiD· 1 shared Alex Dobin· 1 shared Andrea Tanzer· 1 shared Arif Harmanci· 1 shared Brandon L. Ason· 1 shared Carrie A Davis· 1 shared Cedric Notredame· 1 shared Chi-Ming LiiD· 1 shared

Activity by Year

2014-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperBioinformatics

Alessandra BreschiORCID

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2 papers

Recent·Most cited

Dissecting Regulatory Non-Coding Heart Disease GWAS Loci with High-Resolution 3D Chromatin Interactions Reveals Causal Genes with Pathophysiological Relevance to Heart Failure

Richard Gill, Daniel Lu, Ittai E. Eres, Jiamiao Lu, Jixin Cui, Zhongsheng Yu, Tracy Yamawaki, Hong Zhou, Baikang Pei, Junedh Amrute, Yen-Sin Ang, Songli Wang, Kory J. Lavine, Brandon L. Ason, Chi-Ming Li, Yi‐Hsiang Hsu

The paper identifies causal genes in heart disease GWAS loci by integrating Hi-C, chromatin accessibility, and transcriptomic data, revealing regulatory relationships in cardiac fibroblasts.

bioRxiv · Oct 8, 2024 · PreprintGenomics

Enhanced Transcriptome Maps from Multiple Mouse Tissues Reveal Evolutionary Constraint in Gene Expression for Thousands of Genes

Dmitri Pervouchine, Sarah Djebali, Alessandra Breschi, Carrie A Davis, Pablo Prieto Barja, Alex Dobin, Andrea Tanzer, Julien Lagarde, Chris Zaleski, Lei-Hoon See, Meagan Fastuca, Jorg Drenkow, Huaien Wang, Giovanni Bussotti, Baikang Pei, , Thomas R Gingeras

The paper analyzes RNA-seq data from multiple mouse tissues to identify genes with conserved expression patterns across species and cell types, revealing evolutionary constraints in gene expression.

bioRxiv · Oct 30, 2014Bioinformatics