Author

C. Meili

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 5

Signature Assays, Organisms & Methods

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Assay:metagenomics· 4 Research Focus:ecology & biodiversity· 3 Approach:statistical model· 3 Research Focus:cell type annotation· 2 Organism:multiple species· 2 Organism:bacteria (other)· 1 Approach:experimental assay· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

N. H. Youssef· 5 shared A. L. Jones· 3 shared C. Pratt· 3 shared M. S. Elshahed· 3 shared A. P. Foote· 2 shared M. Elshahed· 2 shared P. H. Janssen· 2 shared Y. I. Nagy· 2 shared

Activity by Year

2021-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 32 mutual co-author links

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5 shared papersMicrobiology

N. H. Youssef

Mutual co-authors in cluster

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5 papers

Recent·Most cited

Diversity and community structure of anaerobic gut fungi in the rumen of wild and domesticated herbivores

C. Meili, M. A. Tag ElDein, A. L. Jones, C. D. Moon, C. Andrews, M. R. Kirk, P. H. Janssen, C. J. Yeoman, S. Grace, J.-L. C. Borgogna, A. P. Foote, Y. I. Nagy, M. T. Khashef, A. Yassin, M. S. Elshahed, N. H. Youssef

This study surveys AGF diversity in the rumen of wild and domesticated herbivores, finding high diversity but limited new genera, and identifies host phylogeny as a key factor shaping community structure.

bioRxiv · Aug 29, 2023Microbiology

Anaerobic fungi in the tortoise alimentary tract illuminate early stages of host-fungal symbiosis and Neocallimastigomycota evolution

C. Pratt, C. Meili, A. L. Jones, D. K. Jackson, E. E. England, Y. Wang, S. Hartson, J. Rogers, M. Elshahed, N. H. Youssef

This paper identifies novel anaerobic gut fungi in tortoises, revealing their ancient evolutionary origin and reduced metabolic capabilities compared to mammalian counterparts.

bioRxiv · Aug 25, 2023 · PreprintMicrobiology

Anaerobic gut fungal communities in marsupial hosts

A. Jones, C. Pratt, C. Meili, R. M. Soo, P. Hugenholtz, M. Elshahed, N. H. Youssef

This study characterizes anaerobic gut fungal communities in marsupials, finding low abundance and lack of host-specific selection compared to placental herbivores.

bioRxiv · May 31, 2023Microbiology

Patterns and determinants of the global herbivorous mycobiome

C. Meili, A. L. Jones, A. X. Arreola, j. Habel, C. J. Pratt, R. A. Hanafy, Y. Wang, A. S. Yassin, M. A. TagElDein, C. Moon, P. H. Janssen, M. Shrestha, P. Rajbhandari, M. Nagler, J. M. Vinzelj, , M. S. Elshahed

The paper analyzes AGF diversity across 661 fecal samples from 34 herbivorous species, identifying 56 novel genera and showing that both stochastic and deterministic processes shape AGF communities, with hindgut fermenters having stronger host-specific associations.

bioRxiv · Nov 21, 2022Microbiology

Genomes of novel Myxococcota reveal severely curtailed machineries for predation and cellular differentiation

C. Murphy, C. Cavalliere, J. Cornell, J. Higgs, S. Mares, C. Meili, V. Andreev, N. Bircher, T. Decker, R. Dohmen, A. Eichhorn, A. Grinnell, C. Jett, R. Khadka, J. Liu, , N. H. Youssef

This study analyzes genomes of novel Myxococcota from anaerobic habitats, revealing reduced capacities for predation and cellular differentiation compared to soil-dwelling relatives.

bioRxiv · Jul 6, 2021Microbiology