Author

C. Roth

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Cancer Biology· 2 Biophysics· 1 Physiology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 6 Organism:human· 4 Approach:statistical model· 3 Research Focus:cell type annotation· 2 Research Focus:chromatin & epigenetic regulation· 2 Research Focus:drug response / drug discovery· 2 Assay:whole-genome sequencing· 2 Organism:Arabidopsis· 1

Frequent Co-Authors

J. Heitman· 2 shared P. M. Magwene· 2 shared V. Yadav· 2 shared A. Camarinha-Silva· 1 shared A. Gunkel· 1 shared A. Gusa· 1 shared A. H. C. Vlot· 1 shared B. F. Hörnich· 1 shared

Activity by Year

2020-2024 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 8 mutual co-author links

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2 shared papersMicrobiology

J. Heitman

Mutual co-authors in cluster

Author profile →

8 papers

Recent·Most cited

Epigenomic manipulation reveals the relationship between locus specific chromatin dynamics and gene expression

V. Venu, E. M. Small, C. Roth, S. H. Adikari, A. H. C. Vlot, K. A. Sullivan, C. R. Abeyratne, D. Jacobson, S. R. Starkenburg, K. Y. Sanbonmatsu, C. R. Steadman

The paper investigates how chromatin dynamics and gene expression change after epigenetic drug treatment, finding locus-specific chromatin remodeling and gene expression alterations.

bioRxiv · Jul 17, 2024 · PreprintCancer Biology

Role of van der Waals, electrostatic, and hydrogen-bond interactions for the relative stability of cellulose Iβ and II crystals

R. Kullmann, M. Delbianco, C. Roth, T. R. Weikl

The paper compares the stability of cellulose Iβ and II crystals by analyzing electrostatic, van der Waals, and hydrogen-bond interactions using classical force fields.

bioRxiv · Mar 4, 2024Biophysics

Simulating Interclonal Interactions in Diffuse Large B-Cell Lymphoma

S. R. Ganesh, C. Roth, B. Parekkadan

This paper develops a mathematical model to simulate interclonal interactions in DLBCL, showing cooperative growth and the impact of therapy on tumor dynamics.

bioRxiv · Sep 28, 2023Cancer Biology

Diffusion Tensor Imaging: Influence of segmentation on fiber tracking in the supraspinatus muscle - an inter-operator reliability analysis

S. Vetter, H.-P. Köhler, P. Hepp, H. Steinke, S. Schleifenbaum, J. Theopold, S. Kiem, M. Witt, J. Henkelmann, C. Roth

This study evaluates how muscle segmentation affects fiber tracking in the supraspinatus muscle using diffusion tensor imaging, finding that segmentation does not significantly influence results.

bioRxiv · May 15, 2023 · PreprintPhysiology

Novel taxonomic and functional diversity of bacteria from the upper digestive tract of chicken

B. R. Galicia, J. S. Saenz, T. Yergaliyev, C. Roth, A. Camarinha-Silva, J. Seifert

This study isolates and characterizes 43 bacterial strains from chicken's upper digestive tract, identifies eight new species, and describes their functional diversity and ecological roles.

bioRxiv · May 10, 2023 · PreprintMicrobiology

Genome-wide analysis of heat stress-stimulated transposon mobility in the human fungal pathogen Cryptococcus deneoformans

A. Gusa, V. Yadav, C. Roth, J. D. Williams, E. M. Shouse, P. M. Magwene, J. Heitman, S. Jinks-Robertson

The paper investigates heat stress-induced transposon mobility in Cryptococcus deneoformans using whole-genome sequencing, finding increased retroelement mobilization at 37°C compared to 30°C.

bioRxiv · Jun 10, 2022Microbiology

Rampant transposition following RNAi loss causes hypermutation and antifungal drug resistance in clinical isolates of a human fungal pathogen

S. J. Priest, V. Yadav, C. Roth, T. A. Dahlmann, U. Kuck, P. M. Magwene, J. Heitman

The paper identifies hypermutation and antifungal drug resistance in Cryptococcus neoformans clinical isolates caused by RNAi loss and transposon proliferation.

bioRxiv · Aug 11, 2021Microbiology

Functional requirement of the Arabidopsis importin-α nuclear transport receptor family in autoimmunity mediated by the NLR protein SNC1

D. Lüdke, C. Roth, S. A. Kamrad, J. Messerschmidt, D. Hartken, J. Appel, B. F. Hörnich, Q. Yan, S. Kusch, M. Klenke, A. Gunkel, L. Wirthmueller, M. Wiermer

The paper identifies IMP-3/MOS6 as the main nuclear transport receptor for SNC1, showing its specific requirement for autoimmunity and basal resistance in Arabidopsis.

bioRxiv · May 9, 2020Plant Biology