Author

F. Mantica

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 3 Plant Biology· 1

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Research Focus:chromatin & epigenetic regulation· 3 Research Focus:gene regulatory network inference· 3 Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Approach:comparative / phylogenetic analysis· 2 Organism:human· 2 Organism:Arabidopsis· 1 Assay:bulk RNA-seq· 1

Frequent Co-Authors

M. Irimia· 3 shared A. Echchiki· 1 shared D. A. Hartasanchez· 1 shared D. Marnetto· 1 shared D. Paula· 1 shared D. Weghorn· 1 shared E. Grassi· 1 shared F. Marletaz· 1 shared

Activity by Year

2017-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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3 shared papersEvolutionary Biology

M. Irimia

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Author profile →

4 papers

Recent·Most cited

Parallel evolution of amphioxus and vertebrate small-scale gene duplications

M. Braso-Vives, F. Marletaz, A. Echchiki, F. Mantica, R. D. Acemel, J. L. Gomez-Skarmeta, D. A. Hartasanchez, L. L. Targa, P. Pontarotti, J. J. Tena, I. Maeso, H. Escriva, M. Irimia, M. Robinson-Rechavi

This study compares small-scale gene duplication patterns between amphioxus and vertebrates, finding similar duplication histories and functional constraints despite amphioxus' slower evolution.

bioRxiv · Jan 18, 2022Evolutionary Biology

Evolutionary conservation of A/T-ending codons reflects co-regulation of expression and complex formation.

H. Benisty, X. Hernandez-Alias, M. Weber, M. Anglada-Girotto, F. Mantica, L. Radusky, G. Senger, D. Weghorn, M. Irimia, M. H. Schaefer, L. Serrano

The paper shows that A/T-ending codons are conserved and co-regulated, enabling coordinated protein expression and complex formation across vertebrates.

bioRxiv · Jan 17, 2022Evolutionary Biology

Alternative splicing landscapes in Arabidopsis thaliana across tissues and stress conditions highlight major functional differences with animals

G. Martin, Y. Marquez, F. Mantica, D. Paula, M. Irimia

The paper analyzes alternative splicing in Arabidopsis thaliana across tissues and stress conditions, revealing distinct regulatory patterns compared to animals.

bioRxiv · Nov 10, 2020Plant Biology

Evolutionary rewiring of the human regulatory network by waves of genome expansion

D. Marnetto, F. Mantica, I. Molineris, E. Grassi, I. Pesando, P. Provero

The paper estimates the age of genomic regions in humans to show how newly formed sequences contributed to rewiring regulatory networks through waves of genome expansion.

bioRxiv · Jul 19, 2017Evolutionary Biology