Author

Fokje Zijlstra

Radboud University Nijmegen

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genetic & Genomic Medicine· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Assay:proteomics· 3 Research Focus:differential expression· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Approach:experimental assay· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Dirk J. LefeberiD· 3 shared Alain J. van GooliD· 2 shared Hans J. C. T. WesselsiD· 2 shared Angel AshikoviD· 1 shared Anouk Suppers· 1 shared Dennis Trede· 1 shared Else Kragt· 1 shared Esther Willems· 1 shared

Activity by Year

2021-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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3 shared papersMolecular Biology

Dirk J. LefeberORCID

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3 papers

Recent·Most cited

Plasma glycoproteomics delivers high-specificity disease biomarkers by detecting site-specific glycosylation abnormalities

Hans J. C. T. Wessels, Purva Kulkarni, Maurice F.P. van Dael, Anouk Suppers, Esther Willems, Fokje Zijlstra, Else Kragt, Jolein Gloerich, Pierre-Olivier Schmit, Stuart Pengelley, Kristina Marx, Alain J. van Gool, Dirk J. Lefeber

The paper develops a plasma N-glycoproteomics method to identify high-specificity disease biomarkers by detecting site-specific glycosylation abnormalities in genetic diseases.

Journal of Advanced Research · Sep 6, 2023Peer-reviewedMolecular Biology

The GlycoPaSER prototype as a real-time N-glycopeptide identification tool based on the PaSER parallel computing platform

Gad Armony, Sven Brehmer, Tharan Srikumar, Lennard Pfennig, Fokje Zijlstra, Dennis Trede, Gary H. Kruppa, Dirk J. Lefeber, Alain J. van Gool, Hans J. C. T. Wessels

The paper introduces GlycoPaSER, a real-time glycopeptide identification tool that decomposes spectra and uses specialized algorithms for real-time analysis, matching performance with existing software.

International Journal of Molecular Sciences · Apr 26, 2023Peer-reviewedBioinformatics

Congenital disorder of glycosylation caused by starting site-specific variant in syntaxin-5

Peter T. A. Linders, Eveline C. F. Gerretsen, Angel Ashikov, Mari‐Anne Vals, Rinse de Boer, Natalia H. Revelo, Richard Arts, Melissa Baerenfaenger, Fokje Zijlstra, Karin Huijben, Kimiyo Raymond, Kai Muru, Olga Fjodorova, Sander Pajusalu, Katrin Õunap, , Geert van den Bogaart

This study identifies a congenital disorder of glycosylation caused by a missense variant in the second starting methionine of syntaxin-5, leading to loss of the short isoform and multisystem disease.

Nature Communications · Oct 28, 2021Peer-reviewedGenetic & Genomic Medicine