Author

Frank DiMaio

Primary ORCID profile (0000-0002-7524-8938 · 26 papers)Unclaimed ORCID profile · follow to get notified of new preprints

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Frank DiMaioiD26 papers · University of Washington

Biology Disciplines

Click to filter author papers

Biophysics· 2 Biochemistry· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:cryo-EM· 3 Research Focus:protein structure prediction· 3 Approach:deep learning· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Approach:experimental assay· 1 Organism:human· 1 Research Focus:protein folding & dynamics· 1

Frequent Co-Authors

Ray Yu-Ruei Wang· 2 shared Yifan Cheng· 2 shared A. Radu AricescuiD· 1 shared Abhay Kotecha· 1 shared Benjamin A Barad· 1 shared Benjamin Barad· 1 shared Brandon Frenz· 1 shared C. Alistair Siebert· 1 shared

Activity by Year

2015-2018 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBiochemistry

Ray Yu-Ruei Wang

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Heteromeric GABAA receptor structures in positively-modulated active states

Paul S. Miller, Simonas Masiulis, Tomas Malinauskas, Abhay Kotecha, Shanlin Rao, Sreenivas Chavali, Luigi De Colibus, Els Pardon, Saad Hannan, Suzanne Scott, Zhaoyang Sun, Brandon Frenz, Gianni Klesse, Sai Li, Jonathan M. Diprose, , A. Radu Aricescu

The paper reports cryo-EM and crystal structures of GABAA receptors with ligands, revealing the molecular basis of BZD modulation.

bioRxiv · Jun 5, 2018 · PreprintBiophysics

Automated structure refinement of macromolecular assemblies from cryo-EM maps using Rosetta

Ray Yu-Ruei Wang, Yifan Song, Benjamin Barad, Yifan Cheng, James Fraser, Frank DiMaio

This paper introduces an automated method to refine atomic structures from near-atomic-resolution cryo-EM maps, improving model geometry and fit-to-density while detecting and correcting backbone placement errors.

bioRxiv · Apr 26, 2016Biochemistry

Side-chain-directed model and map validation for 3D Electron Cryomicroscopy

Benjamin A Barad, Nathaniel Echols, Ray Yu-Ruei Wang, Yifan Cheng, Frank DiMaio, Paul D Adams, James S Fraser

This paper introduces EMRinger, a method to validate atomic models against cryo-EM maps by analyzing side-chain dihedral angles, showing its utility in model refinement and radiation damage assessment.

bioRxiv · Feb 3, 2015Biophysics