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I. Consortium

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Cancer Biology· 2 Cell Biology· 1

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Organism:human· 3 Research Focus:clustering· 2 Research Focus:differential expression· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1

Frequent Co-Authors

A. McPherson· 2 shared B. Wang· 2 shared D. Lai· 2 shared F. Kabeer· 2 shared H. Lee· 2 shared J. Biele· 2 shared J. Brimhall· 2 shared J. Pham· 2 shared

Activity by Year

2020-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersCancer Biology

A. McPherson

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3 papers

Recent·Most cited

Evolutionary tracking of cancer haplotypes at single-cell resolution

M. J. Williams, T. Funnell, C. O'Flanagan, A. McPherson, S. Salehi, I. Vazquez-Garcia, F. Kabeer, H. Lee, T. Masud, P. Eirew, D. Yap, B. Wang, J. Brimhall, J. Biele, J. Ting, , S. P. Shah

The paper tracks cancer haplotypes at single-cell resolution, revealing allele-specific alterations and their role in structural variation evolution in human tumors.

bioRxiv · Jun 4, 2021 · PreprintCancer Biology

Highly multiplexed molecular and cellular mapping of breast cancer tissue in three dimensions using mass tomography.

R. Catena, A. Oezcan, L. Kuett, A. Pluess, P. Schraml, H. Moch, I. Consortium, B. Bodenmiller

This study introduces mass tomography to enable 3D analysis of breast cancer tissue using imaging mass cytometry, revealing spatial heterogeneity and micro-invasion dynamics.

bioRxiv · May 24, 2020 · PreprintCell Biology

Single cell fitness landscapes induced by genetic and pharmacologic perturbations in cancer

S. Salehi, F. Kabeer, N. Ceglia, M. Andronescu, M. Williams, K. R. Campbell, T. Masud, B. Wang, J. Biele, J. Brimhall, J. Ting, A. W. Zhang, C. H. OFlanagan, F. Dorri, N. Rusk, , S. P. Shah

This study develops a quantitative fitness model to analyze clonal dynamics in cancer under genetic and pharmacologic perturbations, revealing how mutations and drug resistance shape tumor evolution.

bioRxiv · May 8, 2020Cancer Biology