Author

I. Nishimura

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 2 Ecology· 1 Evolutionary Biology· 1 Pathology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Research Focus:cell type annotation· 3 Research Focus:differential expression· 3 Organism:mouse· 3 Assay:bulk RNA-seq· 2 Research Focus:ecology & biodiversity· 2 Research Focus:cell signaling & trafficking· 1 Research Focus:cell-cell communication· 1

Frequent Co-Authors

A. Hokugo· 3 shared T. Kondo· 3 shared H. Okawa· 2 shared A. Clements· 1 shared A. Gleason· 1 shared B. McEntire· 1 shared B.-W. YING· 1 shared D. Khalil· 1 shared

Activity by Year

2021-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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3 shared papersBioengineering

A. Hokugo

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Silicon Nitride Induces Osteoconduction Via Activated Mitochondrial Oxidative Phosphorylation and Neovascularization

W. D. Gonzales, R. Khade, T. Kondo, S. Arimoto, T. Inagaki, A. Hokugo, K. E. Kaczor-Urbanowicz, B. McEntire, R. M. Bock, T. Ogawa, G. Pezzotti, I. Nishimura

This study shows that silicon nitride induces osteoconduction through mitochondrial oxidative phosphorylation and neovascularization in bone marrow mesenchymal stromal cells.

bioRxiv · Jul 9, 2024 · PreprintBioengineering

Mouse gingival single-cell transcriptomic atlas: An activated fibroblast subpopulation guides oral barrier immunity in periodontitis

T. Kondo, A. Gleason, H. Okawa, A. Hokugo, I. Nishimura

This study identifies an activated fibroblast subpopulation in mouse periodontitis that drives oral inflammation via interactions with neutrophils and ILC3s.

bioRxiv · Apr 13, 2023 · PreprintPathology

Difference in determinants and changing patterns of plant community composition with and without grazing across semi-arid and arid regions in Mongolian steppe

N. I. Ishii, I. Nishimura, Y. Qi, G. Batdelger, M. Kagami, G. Takimoto, T. Sasaki

The paper examines how plant community composition changes with and without grazing in semi-arid and arid Mongolian regions, finding aridity has a significant impact regardless of grazing, but grazing eliminates soil pH effects.

bioRxiv · Dec 24, 2022 · PreprintEcology

Therapeutic downregulation of neuronal PAS domain 2 (Npas2) promotes surgical skin wound healing

Y. Shibuya, A. Hokugo, H. Okawa, T. Kondo, D. Khalil, L. Wang, Y. Roca, A. Clements, H. Sasaki, E. Berry, I. Nishimura, R. Jarrahy

This study identifies a compound, Dwn1, that downregulates Npas2 and accelerates wound healing with reduced scarring in mice.

bioRxiv · Nov 29, 2021Bioengineering

Local adaptation mediated niche expansion in correlation with genetic richness

M. Kurokawa, I. Nishimura, B.-W. YING

The paper investigates the relationship between genetic richness, local adaptation, and niche expansion in Escherichia coli through experimental evolution and fitness assays.

bioRxiv · Nov 22, 2021 · PreprintEvolutionary Biology