Author

J. Bahl

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 4 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:deep learning· 2 Assay:DNA methylation· 2 Research Focus:host-pathogen & immune response· 2 Organism:human· 2 Research Focus:phylogenetics / evolution· 2 Assay:proteomics· 2 Approach:statistical model· 2

Frequent Co-Authors

X. Qiu· 2 shared A. Brown· 1 shared A. S. De Groot· 1 shared C. L. Siepker· 1 shared C. S. Kyriakis· 1 shared D.-K. Kim· 1 shared E. F. Griffin· 1 shared E. W. Howerth· 1 shared

Activity by Year

2019-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 10 mutual co-author links

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Curved chords = mutual co-authorship

2 shared papersEvolutionary Biology

X. Qiu

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Pandemic Risk Assessment for a Swine Influenza A Virus in Comparative Human Substrates

I. Padykula, L. Damodaran, K. T. Young, M. Krunkosky, E. F. Griffin, J. F. North, P. J. Neasham, V. C. Pleiasis, C. L. Siepker, J. B. Stanton, E. W. Howerth, J. Bahl, C. S. Kyriakis, S. M. Tompkins

The paper assesses a swine influenza A virus in animal and human cell models to evaluate pandemic risk, finding varied replication potential across models.

bioRxiv · Feb 24, 2024 · PreprintMicrobiology

Diversity and Evolution of Computationally Predicted T Cell Epitopes against Human Respiratory Syncytial Virus

J. Chen, S. Tan, V. Avadhanula, L. Moise, P. A. Piedra, A. S. De Groot, J. Bahl

This study computationally predicts T cell epitopes in RSV proteins and finds divergent epitope patterns between RSV-A and RSV-B strains, suggesting vaccine updates may be needed for RSV-B.

bioRxiv · Jun 29, 2022Evolutionary Biology

Phylogeny and Metadata Network Database for Epidemiologic Surveillance

G. L. Stott, L. Lyu, G. Veytsel, J. Kuo, R. Lewis, A. Brown, K. Fujimoto, J. Bahl

The paper creates a graph database to integrate SARS-CoV-2 phylogenetic trees, metadata, and surveillance data for phylodynamic analysis.

bioRxiv · Apr 19, 2022 · PreprintEvolutionary Biology

Host diversity and behavior determine patterns of interspecies transmission and geographic diffusion of avian Influenza A subtypes among North American wild reservoir species

J. T. Hicks, K. Friedman, X. Qiu, D.-K. Kim, J. E. Hixson, S. Krauss, R. J. Webby, R. G. Webster, J. Bahl

This study estimates interspecies transmission and geographic diffusion of avian influenza A subtypes among North American wild birds using genomic sequences, finding host diversity and ecology influence spread patterns.

bioRxiv · Sep 29, 2021Evolutionary Biology

Structurally informed evolutionary models improve phylogenetic reconstruction for emerging, seasonal, and pandemic influenza viruses

X. Qiu, J. Bahl

This study develops and evaluates structurally informed partitioning models for influenza virus phylogenetic reconstruction, showing improved performance for pandemic and seasonal strains.

bioRxiv · Dec 13, 2019 · PreprintEvolutionary Biology