Author

J. Bohlen

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 3 Evolutionary Biology· 3

Signature Assays, Organisms & Methods

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Assay:fluorescence / live-cell microscopy· 3 Approach:statistical model· 3 Research Focus:cell type annotation· 2 Research Focus:cell-cell communication· 2 Research Focus:chromatin & epigenetic regulation· 2 Research Focus:clustering· 2 Approach:deep learning· 2 Approach:experimental assay· 2

Frequent Co-Authors

A. Marta· 2 shared P. Tinnefeld· 2 shared T. Dvorak· 2 shared A. Golubtsov· 1 shared A. Sember· 1 shared A. Volenikova· 1 shared B. Levin· 1 shared B.-S. Shin· 1 shared

Activity by Year

2021-2024 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 11 mutual co-author links

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2 shared papersEvolutionary Biology

A. Marta

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Author profile →

6 papers

Recent·Most cited

Reconstructing the phylogeny and evolutionary history of freshwater fishes (Nemacheilidae) across Eurasia since early Eocene

V. Slechtova, T. Dvorak, J. Freyhof, M. Kottelat, B. Levin, A. Golubtsov, V. Slechta, J. Bohlen

This study reconstructs the evolutionary history of the Nemacheilidae fish family across Eurasia over the Cenozoic era, identifying six major clades and tracing their diversification and extinction events.

bioRxiv · Jul 5, 2024Evolutionary Biology

Genetic and karyotype divergence between parents affect clonality and sterility in hybrids

A. Marta, T. Tichopad, O. Bartos, J. Klima, M. shah, V. S. Bohlen, J. Bohlen, K. Halacka, L. Choleva, M. Stöck, D. Dedukh, K. Janko

The paper investigates how genetic and karyotype divergence between parental fish lineages influences asexual gametogenesis and sterility in hybrids.

bioRxiv · Apr 11, 2023Evolutionary Biology

Super-Resolved FRET and Co-Tracking in pMINFLUX

F. Cole, J. Zaehringer, J. Bohlen, T. Schroeder, F. Steiner, F. D. Stefani, P. Tinnefeld

This paper introduces two methods in pMINFLUX to enable nanometer-precise co-localized tracking of fluorophores, bridging the resolution gap between smFRET and co-tracking.

bioRxiv · Mar 24, 2023Biophysics

Deep-Learning Assisted, Single-molecule Imaging analysis (Deep-LASI) of multi-color DNA Origami structures

S. Wanninger, P. Asadiatouei, J. Bohlen, C.-B. Salem, P. Tinnefeld, E. Ploetz, D. C. Lamb

Deep-LASI is a deep learning tool for rapid analysis of single-molecule imaging data, demonstrating accuracy and speed in FRET experiments and multi-color data.

bioRxiv · Jan 31, 2023Biophysics

Sex chromosome differentiation via changes in the Y chromosome repeat landscape in African annual killifishes Nothobranchius furzeri and N. kadleci

J. Stundlova, M. Kreklova, K. Luksikova, A. Volenikova, T. Pavlica, M. Altmanova, M. Reichard, M. Dalikova, S. Pelikanova, A. Marta, S. A. Simanovsky, M. Hirman, M. Jankasek, T. Dvorak, J. Bohlen, , A. Sember

The paper investigates sex chromosome differentiation in two killifish species by analyzing repetitive DNA landscapes, revealing shared XY systems and alternative evolutionary mechanisms.

bioRxiv · Mar 13, 2022Evolutionary Biology

Rapid 40S scanning and its regulation by mRNA structure during eukaryotic translation initiation

J. Wang, C. Alvarado, B.-S. Shin, J. Bohlen, T. E. Dever, J. D. Puglisi

The paper directly observes yeast 43S ribosomal scanning along mRNA 5'UTRs, revealing its speed and structural regulation mechanisms.

bioRxiv · Dec 8, 2021Biophysics