Author

J. Ferrari Gianlupi

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 1 Biophysics· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Approach:statistical model· 2 Research Focus:drug response / drug discovery· 1 Organism:human· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

J. A. Glazier· 2 shared J. O. Aponte-Serrano· 2 shared T. J. Sego· 2 shared E. M. Quardokus· 1 shared J. Crawshaw· 1 shared J. M. Osborne· 1 shared K. Breithaupt· 1 shared L. Brusch· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBiophysics

J. A. Glazier

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2 papers

Recent·Most cited

BiophysicsbioRxivPreprintJan 28, 2021

Generating Agent-Based Multiscale Multicellular Spatiotemporal Models from Ordinary Differential Equations of Biological Systems, with Applications in Viral Infection

T. J. Sego, J. O. Aponte-Serrano, J. Ferrari Gianlupi, J. A. Glazier

This paper develops a method to convert non-spatial ODE models into spatial, agent-based models for multicellular systems, demonstrating applications in viral infection and showing how spatial models can reveal hidden biophysical mechanisms.

DOI 10.1101/2021.01.28.428647

deep learningstatistical model

𝕏 PostBluesky

BioengineeringPLOS Computational BiologyPeer-reviewedDec 21, 2020

A Modular Framework for Multiscale Spatial Modeling of Viral Infection and Immune Response in Epithelial Tissue

T. J. Sego, J. O. Aponte-Serrano, J. Ferrari Gianlupi…·J. A. Glazier

The paper introduces a modular simulation platform to model viral infection and immune response in epithelial tissue, showing that early low-dose antiviral treatment is more effective than late high-dose treatment.

DOI 10.1371/journal.pcbi.1008451

humanspatial transcriptomics

𝕏 PostBluesky