Author

Jean-Baptiste Reynier

Columbia University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:deconvolution· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Abayomi OdetundeiD· 1 shared Abiodun Olaniyi PopoolaiD· 1 shared Adeyinka Gladys FalusiiD· 1 shared Andreas J GruberiD· 1 shared Anna Woodard· 1 shared Avraam TapinosiD· 1 shared Ayodele Sanni· 1 shared Benjamin IzariD· 1 shared

Activity by Year

2021-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperGenomics

Abayomi OdetundeORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Smoother: A Unified and Modular Framework for Incorporating Structural Dependency in Spatial Omics Data

Jiayu Su, Jean-Baptiste Reynier, Xi Fu, Guojie Zhong, Jiahao Jiang, Rydberg Supo Escalante, Yiping Wang, Luis Aparicio, Benjamin Izar, David A. Knowles, Raúl Rabadán

Smoother integrates positional information into non-spatial models for spatial omics data, enabling accurate imputation, deconvolution, and dimensionality reduction in simulated and real datasets.

Genome biology · Dec 18, 2023Peer-reviewedBioinformatics

Whole-genome analysis of Nigerian patients with breast cancer reveals ethnic-driven somatic evolution and distinct genomic subtypes

Naser Ansari‐Pour, Yonglan Zheng, Toshio F. Yoshimatsu, Ayodele Sanni, Mustapha Ajani, Jean-Baptiste Reynier, Avraam Tapinos, Jason J. Pitt, Stefan C. Dentro, Anna Woodard, Padma Sheila Rajagopal, Dominic Fitzgerald, Andreas J Gruber, Abayomi Odetunde, Abiodun Olaniyi Popoola, , Olufunmilayo Ibironke Olopade

The paper analyzes whole-genome data from Nigerian breast cancer patients, identifying ethnic-driven somatic evolution and distinct genomic subtypes associated with African ancestry.

Nature Communications · Nov 26, 2021Peer-reviewedGenomics