Author

John A Browne

University College Dublin

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:gene regulatory network inference· 2 Research Focus:GWAS / association mapping· 2 Approach:statistical model· 2 Assay:ChIP-seq· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

David Evan MacHughiD· 2 shared Stephen Vincent GordoniD· 2 shared Thomas Jonathan HalliD· 2 shared Alan Mark O’DohertyiD· 1 shared Carolina N. CorreiaiD· 1 shared Douglas VernimmeniD· 1 shared Eamonn P. GormleyiD· 1 shared Emily L. ClarkiD· 1 shared

Activity by Year

2020-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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2 shared papersGenomics

David Evan MacHughORCID

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2 papers

Recent·Most cited

Integrative genomics sheds light on the immunobiology of tuberculosis in cattle

John Francis O'Grady, Gillian P. McHugo, James A. Ward, Thomas Jonathan Hall, Sarah L Faherty O’Donnell, Carolina N. Correia, John A Browne, Michael McDonald, Eamonn P. Gormley, Valentina Riggio, James G. D. Prendergast, Emily L. Clark, Hubert Pausch, Kieran G. Meade, Isobel Claire Gormley, , David Evan MacHugh

This study integrates transcriptomic, genomic, and GWAS data to identify genes and eQTLs associated with the PB transcriptome response to M. bovis infection in cattle.

Communications Biology · Mar 24, 2025Peer-reviewedGenomics

Alveolar macrophage chromatin is modified to orchestrate host response to Mycobacterium bovis infection

Thomas Jonathan Hall, Douglas Vernimmen, John A Browne, Michael P. Mullen, Stephen Vincent Gordon, David Evan MacHugh, Alan Mark O’Doherty

The paper identifies transcriptional and chromatin changes in bovine alveolar macrophages during Mycobacterium bovis infection and links them to genetic variants associated with tuberculosis resistance.

Frontiers in Genetics · Feb 7, 2020Peer-reviewedGenomics