Author

Jonathan V. Nguyen

Oregon Health & Science UniversityPrimary ORCID profile (0000-0001-6146-2047 · 2 papers)Unclaimed ORCID profile · follow to get notified of new preprints

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Jonathan V. NguyeniD2 papers · Moffitt Cancer Center

Biology Disciplines

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Bioengineering· 1 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Aaron Reid DoeiD· 1 shared Alexander M MilleriD· 1 shared Angela LiniD· 1 shared Anne O’Donnell‐LuriaiD· 1 shared Avathamsa AthirasalaiD· 1 shared Cristiane Miranda FrançaiD· 1 shared Daniela Marta RothiD· 1 shared Dena R. MataloniD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperBioengineering

Aaron Reid DoeORCID

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2 papers

Recent·Most cited

Endogenous Osteocyte-Osteoclast Signaling Enables Bone Remodeling, Drug Response, and Cancer Invasion in a Nanoscale Calcified Bone-on-a-Chip Model

Maurício Gonçalves da Costa Sousa, Avathamsa Athirasala, Daniela Marta Roth, Mahshid Hosseini, Genevieve E. Romanowicz, Rebekka Duhen, May Anny Alves Fraga, Sofia M. Vignolo, Aaron Reid Doe, Jinho Lee, Jonathan V. Nguyen, Angela Lin, Cristiane Miranda França, Robert E. Guldberg, Luiz E. Bertassoni

bioRxiv · Mar 8, 2026 · PreprintBioengineering

Transcriptome-wide outlier approach identifies individuals with minor spliceopathies

Taylor M. Maurer, Rodrigo Mendez, Rachel A. Ungar, Devon E. Bonner, Dena R. Matalon, Gabrielle Lemire, Pagé C. Goddard, Evin M. Padhi, Alexander M Miller, Jonathan V. Nguyen, Jialan Ma, Kevin S. Smith, Stuart Alexander Scott, Linda Liao, Zena Ng, , Vijay S Ganesh

The paper identifies individuals with minor spliceopathies by analyzing transcriptome-wide splicing outliers in RNA-seq data from rare disease cohorts.

The American Journal of Human Genetics · Sep 19, 2025Peer-reviewedGenetic & Genomic Medicine