Author

Karl Kilborn

3i (United Kingdom)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Neuroscience· 3 Bioengineering· 1

Signature Assays, Organisms & Methods

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Assay:imaging· 4 Approach:experimental assay· 3 Organism:mouse· 3 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

Baris N. OzbayiD· 3 shared Diego RestrepoiD· 3 shared Emily A. GibsoniD· 3 shared Gregory L. FutiaiD· 3 shared Ethan G. HughesiD· 2 shared Michael Andrew ThorntoniD· 2 shared Michael E. StocktoniD· 2 shared Alec Teel· 1 shared

Activity by Year

2022-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 40 mutual co-author links

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Curved chords = mutual co-authorship

3 shared papersNeuroscience

Baris N. OzbayORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

CelFDrive: Artificial Intelligence assisted microscopy for automated detection of rare events

Scott Brooks, Sara Toral-Pérez, Nina Pucekova, David Corcoran, Karl Kilborn, Brian Bodensteiner, Hella Baumann, Nigel John Burroughs, Andrew D. McAinsh, Till Bretschneider

CelFDrive automates high-resolution 3D imaging of cells using deep learning for efficient detection of rare events in large populations.

Journal of Cell Science · Oct 6, 2026Peer-reviewedBioengineering

Opto2P-FCM: A MEMS based miniature two-photon microscope with two-photon patterned optogenetic stimulation

Gregory L. Futia, M. Zohrabi, Connor M. McCullough, Alec Teel, Fabio Simoes de Souza, Ryan Oroke, Eduardo J. Miscles, Baris N. Ozbay, Karl Kilborn, Victor M. Bright, Diego Restrepo, Juliet T. Gopinath, Emily A. Gibson

This paper introduces a miniature two-photon microscope with optogenetic stimulation for studying neural activity in freely moving mice.

Optica · Jul 2, 2026Peer-reviewedNeuroscience

Long-term in vivo three-photon imaging reveals region-specific differences in healthy and regenerative oligodendrogenesis

Michael Andrew Thornton, Gregory L. Futia, Michael E. Stockton, Samuel Alexander Budoff, Alexandra N. Ramirez, Baris N. Ozbay, Omer Tzang, Karl Kilborn, Alon Poleg-Polsky, Diego Restrepo, Emily A. Gibson, Ethan G. Hughes

This study uses three-photon imaging to show that white matter generates more oligodendrocytes than gray matter, but gray matter shows faster growth rates and regenerative deficits after injury.

Nature Neuroscience · Mar 27, 2024Peer-reviewedNeuroscience

Characterization of red fluorescent reporters for dual-color in vivo three-photon microscopy

Michael Andrew Thornton, Gregory L. Futia, Michael E. Stockton, Baris N. Ozbay, Karl Kilborn, Diego Restrepo, Emily A. Gibson, Ethan G. Hughes

The paper evaluates tdTomato and mScarlet fluorescent proteins for dual-color three-photon microscopy in the mouse brain, finding high signal-to-background in specific wavelength ranges.

Neurophotonics · Apr 28, 2022Peer-reviewedNeuroscience