Author

M. Alshalalfa

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Immunology· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Assay:bulk RNA-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

A. Augspach· 1 shared A. K. Tewari· 1 shared A. M. Bergman· 1 shared A. Sboner· 1 shared A.-C. Uldry· 1 shared B. Cioni· 1 shared D. Prandi· 1 shared D. Wilkes· 1 shared

Activity by Year

2018-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

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1 shared paperCancer Biology

A. Augspach

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Role of Specialized mSWI/SNF Complexes in Prostate Cancer Lineage Plasticity

J. Cyrta, A. Augspach, M. R. de Filippo, D. Prandi, P. Thienger, M. Benelli, V. Cooley, R. Bareja, D. Wilkes, S.-S. Chae, P. Cavaliere, N. Dephoure, A.-C. Uldry, S. B. Lagache, S. Cohen, , M. Rubin

The paper investigates the role of mSWI/SNF complexes in NEPC lineage plasticity using patient data and cell models, finding deregulated subunits and SMARCA4 overexpression linked to aggressive disease.

Nature Communications · Nov 3, 2020Peer-reviewedCancer Biology

Human Prostate Cancer-Associated Macrophage Subtypes with Prognostic Potential Revealed by Single-cell Transcriptomics

J. C. Siefert, B. Cioni, M. J. Muraro, M. Alshalalfa, J. Vivie, H. van der Poel, F. Y. Feng, L. Wessels, W. Zwart, A. M. Bergman

The paper identifies three macrophage subtypes in human prostate cancer using single-cell transcriptomics and develops a gene signature linked to patient survival.

bioRxiv · Jun 19, 2020Immunology

Epigenetic analysis identifies factors driving racial disparity in prostate cancer

R. Rai, S. S. Yadav, H. Pan, J. O'Connor, M. Alshalalfa, E. Davicioni, E. Taioli, O. Elemento, A. K. Tewari, K. K. Yadav

The paper analyzes epigenetic differences between African American and Caucasian prostate cancer patients to identify factors contributing to racial disparities in disease aggressiveness and outcomes.

bioRxiv · Jun 20, 2018Cancer Biology