Author

M. Alu

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 1 Cell Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:imaging· 1 Organism:mouse· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

C. Loomis· 2 shared A. A. S. Shadaloey· 1 shared A. Karz· 1 shared A. P. Pankow· 1 shared A. Rubanov· 1 shared A. Rubens· 1 shared A. Tsirigos· 1 shared B. R. Rosenberg· 1 shared

Activity by Year

2023-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersCancer Biology

C. Loomis

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

MetFinder: a neural network-based tool for automated quantitation of metastatic burden in histological sections from animal models

A. Karz, N. Coudray, E. Bayraktar, K. Galbraith, G. Jour, A. A. S. Shadaloey, N. Eskow, A. Rubanov, M. Navarro, R. Moubarak, G. Baptiste, G. Levinson, V. Mezzano, M. Alu, C. Loomis, , E. Hernando

MetFinder uses a deep neural network to automate metastasis burden quantification in histological sections from mouse models, improving throughput and resolution compared to current methods.

bioRxiv · Sep 7, 2023 · PreprintCancer Biology

A comparative study of in vitro air-liquid interface culture models of the human airway epithelium evaluating cellular heterogeneity and gene expression at single cell resolution

R. A. Prescott, A. P. Pankow, M. de Vries, K. Crosse, R. S. Patel, M. Alu, C. Loomis, V. Torres, S. B. Koralov, E. N. Ivanova, M. Dittmann, B. R. Rosenberg

This study compares gene expression and cellular heterogeneity in HAE cultures derived from BCi-NS1.1 cell lines and primary cells using scRNA-Seq, finding similar morphology and transcriptional patterns but some interferon gene differences.

bioRxiv · Feb 27, 2023 · PreprintCell Biology