Author

M. Seidl

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 8 Plant Biology· 3 Immunology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 7 Research Focus:chromatin & epigenetic regulation· 5 Organism:fungi (other)· 5 Research Focus:host-pathogen & immune response· 5 Assay:whole-genome sequencing· 4 Research Focus:cell type annotation· 3 Assay:DNA methylation· 3 Research Focus:gene regulatory network inference· 3

Frequent Co-Authors

B. Thomma· 10 shared G. van den Berg· 6 shared J. Depotter· 4 shared M. Kramer· 3 shared X. Shi· 3 shared D. Cook· 2 shared T. Wood· 2 shared A. Kombrink· 1 shared

Activity by Year

2016-2021 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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10 shared papersMicrobiology

B. Thomma

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12 papers

Recent·Most cited

An ancient antimicrobial protein co-opted by a fungal plant pathogen for in planta mycobiome manipulation

N. Snelders, G. Petti, G. van den Berg, M. Seidl, B. Thomma

This paper shows that the fungal pathogen Verticillium dahliae uses an ancient antimicrobial protein, VdAMP3, to manipulate fungal microbiota during plant colonization.

bioRxiv · Jun 10, 2021Microbiology

Local rather than global H3K27me3 dynamics associates with differential gene expression in Verticillium dahliae

M. Kramer, M. Seidl, B. P. H. J. Thomma, D. Cook

The paper shows that H3K27me3 dynamics are not globally erased during differential gene expression in Verticillium dahliae, but rather local changes associate with some differentially expressed genes.

bioRxiv · May 4, 2021Microbiology

The interspecific fungal hybrid Verticillium longisporum displays sub-genome-specific gene expression

J. Depotter, F. van Beveren, L. Rodriguez-Moreno, M. Kramer, E. Chavarro Carrero, G. Lorencini Fiorin, G. van den Berg, T. Wood, B. Thomma, M. Seidl

This study examines the genomic and transcriptomic dynamics of the fungal hybrid Verticillium longisporum, revealing sub-genome-specific gene expression patterns and evolutionary adaptations.

bioRxiv · Feb 22, 2021 · PreprintMicrobiology

DNA methylation in Verticillium dahliae requires only one of three putative DNA methyltransferases, yet is dispensable for growth, development and virulence

M. Kramer, D. Cook, G. van den Berg, M. Seidl, B. Thomma

This study identifies Dim2 as the primary DNA methyltransferase in Verticillium dahliae, showing that DNA methylation is dispensable for growth, development, and virulence.

bioRxiv · Aug 26, 2020Microbiology

ADA2 is a lysosomal DNase regulating the type-I interferon response

O. K. Greiner-Tollersrud, M. Krausz, E. Bartok, V. Boehler, H. Ebersbach, S. Baash, D. Guerini, G. Hartmann, K. Huebscher, G. Kochs, M. Marchant, A. Polyzou, J. Schepp, M. Seidl, C. R. Smulski, , M. Proietti

The paper identifies ADA2 as a lysosomal DNase that regulates the type-I interferon response by degrading cGAS/Sting-activating ligands in DADA2 patients.

bioRxiv · Jun 21, 2020 · PreprintImmunology

Comparative genomics of Verticillium dahliae isolates reveals the in planta-secreted effector protein recognized in V2 tomato plants

E. Chavarro-Carrero, J. Vermeulen, D. Torres, T. Usami, H. Schouten, Y. Bai, M. Seidl, B. Thomma

The paper identifies an avirulence effector, Av2, from Verticillium dahliae race 2 strains that is recognized by the V2 resistance gene in tomato plants.

bioRxiv · Jun 16, 2020Plant Biology

Verticillium dahliae strains that infect the same host plant display highly divergent effector catalogs

H. Gibriel, J. Li, L. Zhu, M. Seidl, B. Thomma

The paper shows that V. dahliae strains infecting the same host have divergent effector repertoires, suggesting redundancy in effector function across lineages.

bioRxiv · Jan 23, 2019 · PreprintPlant Biology

The genome of the fungal pathogen Verticillium dahliae reveals extensive bacterial to fungal gene transfer

X. Shi, M. van Koosten, J. Depotter, B. Thomma, M. Seidl

This study identifies extensive horizontal gene transfer from bacterial origins in the genome of the fungal pathogen Verticillium dahliae.

bioRxiv · Dec 3, 2018Microbiology

In silico prediction and characterisation of secondary metabolite clusters in the plant pathogenic fungus Verticillium dahliae

X. Shi, R. Pedro de Jove, J. Depotter, M. Ebert, M. Seidl, B. Thomma

This study predicts and characterizes secondary metabolite clusters in Verticillium dahliae to uncover its potential secondary metabolites.

bioRxiv · Dec 1, 2018Microbiology

Evolution within the fungal genus Verticillium is characterized by chromosomal rearrangement and gene loss

X. Shi, L. Faino, G. van den Berg, B. Thomma, M. Seidl

The paper sequenced nine Verticillium species genomes to study their evolution, finding frequent chromosomal rearrangements and gene loss, with few species-specific genes.

bioRxiv · Jul 17, 2017Microbiology

A previously established divergent lineage of the hybrid fungal pathogen Verticillium longisporum emerges as stem striping pathogen in British oilseed rape

J. Depotter, M. Seidl, G. van den berg, B. Thomma, T. Wood

The paper identifies a previously unknown genetic division within Verticillium longisporum causing stem striping in UK oilseed rape, showing its genetic diversity exceeds that of other populations.

bioRxiv · Jan 23, 2017Microbiology

Verticillium dahliae LysM effectors differentially contribute to virulence on plant hosts

A. Kombrink, H. Rovenich, X. Shi-Kunne, E. Rojas-Padilla, G. van den Berg, E. Domazakis, R. de Jonge, D.-J. Valkenburg, A. Sanchez-Vallet, M. Seidl, B. Thomma

The paper identifies a lineage-specific LysM effector in Verticillium dahliae that contributes to virulence on tomato but not on Arabidopsis or Nicotiana benthamiana.

bioRxiv · Nov 5, 2016Plant Biology