Author

M. Valcanis

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:experimental assay· 1 Approach:genetic perturbation / CRISPR· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

B. P. Howden· 2 shared A. Getahun Strobel· 1 shared A. Goncalves da Silva· 1 shared A. J. Hayes· 1 shared A. Jenney· 1 shared C. L. Gorrie· 1 shared D. Hocking· 1 shared J. A. Lacey· 1 shared

Activity by Year

2022-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersMicrobiology

B. P. Howden

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Genetic heterogeneity in the Salmonella Typhi Vi capsule locus: A population genomic study from Fiji

A. Getahun Strobel, A. J. Hayes, W. Wirth, M. Mua, T. Saumalua, O. Cabenatabua, V. Soqo, V. Rosa, N. Wang, J. A. Lacey, D. Hocking, M. Valcanis, A. Jenney, B. P. Howden, S. Duchene, , M. R. Davies

This study examines genetic diversity in the Vi capsule locus of Salmonella Typhi in Fiji, identifying convergent evolution of tviE mutations globally and highlighting the need for further functional analysis.

bioRxiv · Dec 4, 2023 · PreprintMicrobiology

Bridging the gap between bioinformatics and the clinical and public health microbiology laboratory: An ISO-accredited genomics workflow for antimicrobial resistance

N. L. Sherry, K. Horan, S. A. Ballard, A. Goncalves da Silva, C. L. Gorrie, M. B. Schultz, K. Stevens, M. Valcanis, M. Sait, T. P. Stinear, B. P. Howden, T. Seemann

This paper develops and validates abritAMR, an ISO-accredited bioinformatics platform for detecting antimicrobial resistance genes with high accuracy and specificity.

bioRxiv · May 26, 2022 · PreprintMicrobiology