Author

Mariia Bazarevich

Skolkovo Institute of Science and Technology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1 Molecular Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Assay:Hi-C· 4 Research Focus:gene regulatory network inference· 3 Approach:statistical model· 3 Organism:human· 2 Research Focus:spatial domain detection· 2 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Ekaterina E. KhrameevaiD· 3 shared Sergey V. RaziniD· 3 shared Sergey V. UlianoviD· 3 shared Alexander V. CherkasoviD· 2 shared Anna D. KononkovaiD· 2 shared Anna V. TvorogovaiD· 2 shared Diana ZagirovaiD· 2 shared Ilya A PleteneviD· 2 shared

Activity by Year

2021-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersBioinformatics

Ekaterina E. KhrameevaORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Accelerated Aging Signatures in 3D Genome Organization and Transcriptome in Schizophrenia

Kirill A. Ulianov, Diana Zagirova, Anna D. Kononkova, Anastasiia Dudkovskaia, Maria N. Molodova, Kirill V. Morozov, Olga Efimova, Mariia Bazarevich, Alexander V. Cherkasov, Polina Morozova, Anna V. Tvorogova, Ilya A Pletenev, Nikolay V. Kondratyev, Вера Евгеньевна Голимбет, Sergey V. Razin, , Ekaterina E. Khrameeva

This study identifies accelerated aging patterns in 3D genome organization and transcriptome in schizophrenia using Hi-C data and transcriptomic analysis.

bioRxiv · May 28, 2026 · PreprintBioinformatics

Extrusion fountains are hallmarks of chromosome organization emerging upon zygotic genome activation

Aleksandra A. Galitsyna, Sergey V. Ulianov, Mariia Bazarevich, Nikolai S. Bykov, Marina Veil, Meijiang Gao, Kristina Perevoschikova, Mikhail Sergeevich Gelfand, Sergey V. Razin, Leonid A. Mirny, Daria Onichtchouk

The paper identifies 'fountains' as enhancer-specific chromosome organization elements emerging during zygotic genome activation in zebrafish and mouse.

Nature Communications · Feb 14, 2026Peer-reviewedMolecular Biology

Extensive long-range polycomb interactions and weak compartmentalization are hallmarks of human neuronal 3D genome

Ilya A Pletenev, Mariia Bazarevich, Diana Zagirova, Anna D. Kononkova, Alexander V. Cherkasov, Olga Efimova, Eugenia A. Tiukacheva, Kirill V. Morozov, Kirill A. Ulianov, Dmitriy Komkov, Anna V. Tvorogova, Вера Евгеньевна Голимбет, Nikolay V. Kondratyev, Sergey V. Razin, Philipp Khaitovich, , Ekaterina E. Khrameeva

The paper maps 3D genome architecture in neuronal and non-neuronal cells, finding reduced compartmentalization and increased long-range polycomb interactions in neurons.

Nucleic Acids Research · Apr 6, 2024Peer-reviewedGenomics

Hi-C Resolution Enhancement with Genome Sequence Data

Dmitrii V. Kriukov, Mark Zaretckii, Igor Kozlovskii, Mikhail Zybin, Nikita Koritskiy, Mariia Bazarevich, Ekaterina E. Khrameeva

This paper develops deep-learning methods to enhance Hi-C data resolution using genome sequence information and provides open-source code.

bioRxiv · Oct 25, 2021 · PreprintSystems Biology