Author

Nikolay V. Kondratyev

Mental Health Research Center of Russian Academy of Medical SciencesORCID 0000-0002-5134-6007Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Bioinformatics· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Organism:human· 4 Approach:statistical model· 4 Research Focus:gene regulatory network inference· 3 Assay:bulk RNA-seq· 2 Assay:Hi-C· 2 Research Focus:spatial domain detection· 2 Research Focus:benchmarking· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Вера Евгеньевна ГолимбетiD· 3 shared Alexander V. CherkasoviD· 2 shared Anna D. KononkovaiD· 2 shared Anna V. TvorogovaiD· 2 shared Celso ArangoiD· 2 shared Diana ZagirovaiD· 2 shared Ekaterina E. KhrameevaiD· 2 shared Ilya A PleteneviD· 2 shared

Activity by Year

2019-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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3 shared papersBioinformatics

Вера Евгеньевна ГолимбетORCID

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Author profile →

4 papers

Recent·Most cited

Accelerated Aging Signatures in 3D Genome Organization and Transcriptome in Schizophrenia

Kirill A. Ulianov, Diana Zagirova, Anna D. Kononkova, Anastasiia Dudkovskaia, Maria N. Molodova, Kirill V. Morozov, Olga Efimova, Mariia Bazarevich, Alexander V. Cherkasov, Polina Morozova, Anna V. Tvorogova, Ilya A Pletenev, Nikolay V. Kondratyev, Вера Евгеньевна Голимбет, Sergey V. Razin, , Ekaterina E. Khrameeva

This study identifies accelerated aging patterns in 3D genome organization and transcriptome in schizophrenia using Hi-C data and transcriptomic analysis.

bioRxiv · May 28, 2026 · PreprintBioinformatics

Co-expression-based models improve eQTL predictions and highlightnovel transcriptome-wide genes associated with schizophrenia

Fabiana Rossi, Leonardo Sportelli, Gianluca Christos Kikidis, Giulia Grassi, Fabio Di Camillo, Alessandro Bertolino, Giuseppe Blasi, Christopher Borcuk, Daniela Fusco, Thomas M. Hyde, Joel E. Kleinman, Davide Marnetto, Silvia Pellegrini, Antonio Rampino, Benedetto Vitiello, , Giulio Pergola

The paper introduces co-expression-based models to improve eQTL predictions and identifies novel schizophrenia-associated genes using brain RNA-seq data.

bioRxiv · Feb 11, 2026 · PreprintGenomics

Extensive long-range polycomb interactions and weak compartmentalization are hallmarks of human neuronal 3D genome

Ilya A Pletenev, Mariia Bazarevich, Diana Zagirova, Anna D. Kononkova, Alexander V. Cherkasov, Olga Efimova, Eugenia A. Tiukacheva, Kirill V. Morozov, Kirill A. Ulianov, Dmitriy Komkov, Anna V. Tvorogova, Вера Евгеньевна Голимбет, Nikolay V. Kondratyev, Sergey V. Razin, Philipp Khaitovich, , Ekaterina E. Khrameeva

The paper maps 3D genome architecture in neuronal and non-neuronal cells, finding reduced compartmentalization and increased long-range polycomb interactions in neurons.

Nucleic Acids Research · Apr 6, 2024Peer-reviewedGenomics

Analyses of rare and common alleles in parent-proband trios implicate rare missense variants in SLC6A1 in schizophrenia and confirm the involvement of loss of function intolerant and neurodevelopmental disorder genes.

Elliott Rees, Jun Han, Joanne Morgan, Noa Carrera, Valentina Escott‐Price, Andrew J. Pocklington, Madeleine Duffield, Lynsey S. Hall, Sophie E. Legge, Antonio F. Pardiñas, Alexander L. Richards, Julian Roth, Tatyana Lezheiko, Nikolay V. Kondratyev, Вера Евгеньевна Голимбет, , Michael John Owen

The paper analyzes rare and common alleles in schizophrenia trios, identifying rare missense variants in SLC6A1 and confirming the role of neurodevelopmental disorder genes.

bioRxiv · Apr 18, 2019 · PreprintGenetics