circVDJ-seq for T cell clonotype detection in single-cell and spatial multi-omics
Izabela Plumbom, Benedikt Obermayer, Raphael Raspe, Anna Pascual Reguant, Ilan Theurillat, Tancredi Massimo Pentimalli, Yu-Hsin Hsieh, Marine Gil, Carola Dietrich, Michaela Seeger-Zografakis, Claudia Quedenau, Jeannine Wilde, Caroline Braeuning, Cornelius Fischer, Markus Schuelke, , Thomas Conrad
The paper introduces circVDJ-seq for efficient T cell receptor profiling from single-cell and spatial multi-omics data, revealing distinct immune microenvironments and T cell clonality patterns in various clinical contexts.
Genome Medicine · Jun 10, 2026Peer-reviewedGenomics