Author

Mingzhu Shan

Chinese Academy of Agricultural Sciences

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genetics· 1 Genomics· 1 Zoology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 3 Research Focus:gene regulatory network inference· 3 Approach:statistical model· 3 Research Focus:database / resource· 2 Assay:ATAC-seq· 1 Assay:CUT&Tag· 1 Approach:deep learning· 1 Approach:experimental assay· 1

Frequent Co-Authors

Zhangyuan PaniD· 3 shared Dailu GuaniD· 2 shared David Evan MacHughiD· 2 shared Emily L. ClarkiD· 2 shared Guiping ZhaoiD· 2 shared Guoqing ZhangiD· 2 shared Hao LiiD· 2 shared Hao YangiD· 2 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersGenetics

Zhangyuan PanORCID

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3 papers

Recent·Most cited

A multi-tissue epigenomic atlas links the sheep non-coding genome to domestication and complex traits

Zhu Meng, Shiwen Zhang, Ziyang Zhuang, Jiayi He, Fei Liu, Lingyun Wu, Xiangrong Sun, Jingsheng Lu, Xinyi Li, Hao Yang, Mian Gong, Xiaolong Du, Qiao Mei, Hao Li, Guoqing Zhang, , Zhangyuan Pan

SheepEpimap combines 516 histone CUT&Tag, ATAC-seq and RNA-seq datasets from 43 sheep tissues to annotate 2.93 million cis-regulatory elements and 145,407 allele-specific variants for trait interpretation.

bioRxiv · Aug 26, 2026 · PreprintGenetics✦ In-depth digest

A multi-tissue atlas of genetic regulatory effects in sheep

Mian Gong, Ziyang Zhuang, Xiangrong Sun, Yuan Xu, Huan-Huan Zhang, Yanan Wang, Dailu Guan, Ran Li, Xiaoning Lu, Zhonghao Bai, Pingjie Feng, Meiwen Song, Min Tian, Jingsheng Lu, Mingshan Wang, , Lingzhao Fang

The paper presents a multi-tissue sheep atlas identifying regulatory variants and their effects on molecular phenotypes, revealing allelic heterogeneity and evolutionary patterns.

bioRxiv · Nov 3, 2025 · PreprintGenomics

Tissue-specific and functional loci analysis of CASP14 gene in the sheep horn

Xiaoning Lu, Guoqing Zhang, Hao Yang, Mingzhu Shan, Xiaoxu Zhang, Yuqin Wang, Junyan Bai, Zhangyuan Pan

This study analyzes the CASP14 gene's tissue-specific expression and functional loci in sheep horns using RNA-Seq, WGS, and KASP assays, identifying three potential functional sites linked to horn development.

PLoS ONE · Nov 21, 2024Peer-reviewedZoology