Author

Lingyun Wu

Qingdao Agricultural University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Assay:ATAC-seq· 1 Assay:bulk RNA-seq· 1 Assay:CUT&Tag· 1 Research Focus:database / resource· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Chunhuan ReniD· 1 shared Dailu GuaniD· 1 shared David Evan MacHughiD· 1 shared Dongdong WangiD· 1 shared Emily L. ClarkiD· 1 shared Fei Liu· 1 shared Guiping ZhaoiD· 1 shared Guoqing ZhangiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperGenetics

Chunhuan RenORCID

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2 papers

Recent·Most cited

CycDelta: Multimodal Residue-Graph Learning of Permeability Changes in Cyclic Peptides

Jie Qian, Yu Zhou, Yaning Cui, Zhifeng Gao, Lingyun Wu, Sean Li, Maohua Yang, Dongdong Wang

CycDelta is a multimodal residue-graph model for predicting permeability changes in cyclic peptides by comparing within-source permeability differences, outperforming baselines on out-of-distribution and zero-shot tasks.

bioRxiv · Sep 24, 2026 · PreprintBioinformatics

A multi-tissue epigenomic atlas links the sheep non-coding genome to domestication and complex traits

Zhu Meng, Shiwen Zhang, Ziyang Zhuang, Jiayi He, Fei Liu, Lingyun Wu, Xiangrong Sun, Jingsheng Lu, Xinyi Li, Hao Yang, Mian Gong, Xiaolong Du, Qiao Mei, Hao Li, Guoqing Zhang, , Zhangyuan Pan

SheepEpimap combines 516 histone CUT&Tag, ATAC-seq and RNA-seq datasets from 43 sheep tissues to annotate 2.93 million cis-regulatory elements and 145,407 allele-specific variants for trait interpretation.

bioRxiv · Aug 26, 2026 · PreprintGenetics✦ In-depth digest