Author

P.-H. Hsieh

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 3 Cell Biology· 1

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Organism:Arabidopsis· 3 Research Focus:chromatin & epigenetic regulation· 3 Assay:DNA methylation· 3 Approach:experimental assay· 3 Approach:statistical model· 3 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1

Frequent Co-Authors

R. L. Fischer· 3 shared Y. Choi· 3 shared D. Zilberman· 2 shared J. M. Frost· 2 shared T.-F. Hsieh· 2 shared A. Runkel· 1 shared E. Struck· 1 shared G.-T. Park· 1 shared

Activity by Year

2017-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

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3 shared papersPlant Biology

R. L. Fischer

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Temporal transcriptome analysis of the endothelial response to tumour necrosis factor

E. Struck, T. Belova, P.-H. Hsieh, J. Odeberg, M. L. Kuijjer, P. Dusart, L. Butler

This study analyzes the temporal transcriptional response of endothelial cells to TNF, identifying two distinct phases of gene regulation and uncovering novel genes involved in the acute response.

bioRxiv · Jun 4, 2023 · PreprintCell Biology

Embryo-specific epigenetic mechanisms reconstitute the CHH methylation landscape during Arabidopsis embryogenesis

P.-H. Hsieh, J. M. Frost, Y. Choi, T.-F. Hsieh, D. Zilberman, R. L. Fischer

This study identifies embryo-specific epigenetic mechanisms that reprogram CHH methylation during Arabidopsis embryogenesis, revealing distinct roles for RdDM and CMT2 pathways.

bioRxiv · Apr 6, 2023 · PreprintPlant Biology

H2A.X mutants exhibit enhanced DNA demethylation in Arabidopsis thaliana

J. M. Frost, J. Lee, P.-H. Hsieh, S. J. Lin, Y. Min, M. Bauer, A. Runkel, H.-T. Cho, T.-F. Hsieh, Y. Choi, R. L. Fischer

This study shows that H2A.X mutants in Arabidopsis thaliana exhibit reduced CG DNA methylation in endosperm, primarily in transposons and intergenic regions, suggesting H2A.X's role in maintaining methylation homeostasis.

bioRxiv · Jan 8, 2023 · PreprintPlant Biology

The FACT complex is required for DNA demethylation at heterochromatin during reproduction in Arabidopsis

J. Frost, M. Y. Kim, G.-T. Park, P.-H. Hsieh, M. Nakamura, S. Lin, H. Yoo, J. Choi, Y. Ikeda, T. Kinoshita, Y. Choi, D. Zilberman, R. L. Fischer

This study shows that the FACT complex facilitates DME-mediated DNA demethylation at heterochromatin during Arabidopsis reproduction by enabling access to GC-rich, nucleosome-dense regions.

bioRxiv · Sep 12, 2017Plant Biology