Author

Patricia Galliker

Institute of Molecular and Clinical Ophthalmology Basel

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Neuroscience· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Organism:human· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Assay:ATAC-seq· 1 Research Focus:clustering· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Dinko PavlinićiD· 2 shared Magdalena RenneriD· 2 shared Simone PicelliiD· 2 shared Yanyan HouiD· 2 shared Ákos KusnyerikiD· 1 shared Aldin SrdanoviciD· 1 shared Aline X.S. Santos· 1 shared Andreas R. HierlemanniD· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 40 mutual co-author links

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2 shared papersSystems Biology

Dinko PavlinićORCID

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2 papers

Recent·Most cited

Multimodal spatiotemporal phenotyping of human organoid development

Philipp Wahle, Giovanna Brancati, Christoph Harmel, Zhisong He, Gabriele Gut, Aline X.S. Santos, Qianhui Yu, Pascal Noser, Jonas Simon Fleck, Bruno Gjeta, Dinko Pavlinić, Simone Picelli, Maximilian Hess, Gregor W. Schmidt, Tom T. A. Lummen, , J. Gray Camp

This paper develops a multimodal approach to study human retinal organoid development, integrating spatial, transcriptomic, and chromatin accessibility data to create a virtual atlas of retinal development.

bioRxiv · Mar 16, 2022 · PreprintSystems Biology

Cell types of the human retina and its organoids at single-cell resolution: developmental convergence, transcriptomic identity, and disease map

Cameron S. Cowan, Magdalena Renner, Martina De Gennaro, Brigitte Gross Scherf, David Goldblum, Yanyan Hou, Martin Munz, Tiago Martins Rodrigues, Jacek Król, Tamás Szikra, Rachel Cuttat, Annick Waldt, Panagiotis Papasaikas, Roland Diggelmann, Claudia P. Patino-Alvarez, , Botond Roska

This study compares cell-type development and transcriptomes in human retinal organoids and adult retinas, finding convergence in transcriptomes and cell-type-specific disease gene expression.

Cell · Sep 1, 2020Peer-reviewedNeuroscience