Author

R. Abu-Shumays

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Organism:E. coli· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1

Frequent Co-Authors

M. Akeson· 2 shared M. Jain· 2 shared A. N. Brooks· 1 shared E. K. Robinson· 1 shared E. K. Wakeland· 1 shared H. Olsen· 1 shared K. Viswanathan· 1 shared M. Cattle· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersBioengineering

M. Akeson

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2 papers

Recent·Most cited

BioengineeringbioRxivApr 26, 2021

Direct Nanopore Sequencing of Individual Full Length tRNA Strands

N. Thomas, V. Poodari, M. Jain…·R. Abu-Shumays

This paper describes a method for direct tRNA sequencing using Oxford Nanopore MinION, achieving 76-92% full-length reads and detecting all 42 tRNA isoacceptors in E. coli.

DOI 10.1021/acsnano.1c06488

E. colilong-read sequencing

𝕏 PostBluesky

ImmunologybioRxivJul 6, 2020

Inflammation Drives Alternative First Exon usage to Regulate Immune Genes including a Novel Iron Regulated Isoform of Aim2

E. K. Robinson, P. Jagannatha, S. Covarrubias…·S. Carpenter

The paper identifies inflammation-induced alternative first exon usage in immune genes, revealing a novel iron-regulated Aim2 isoform with a 5′UTR iron-responsive element.

DOI 10.7554/elife.69431

humanmouse

𝕏 PostBluesky