Author

Rongyao Huang

Kunming Institute of Zoology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Approach:large language model· 1 Organism:rat· 1 Assay:Ribo-seq· 1 Approach:statistical model· 1

Frequent Co-Authors

Christoph W. TurckiD· 1 shared Dongdong QiniD· 1 shared Haiteng DengiD· 1 shared Hao LiiD· 1 shared Jian Lu· 1 shared Junbing ZhangiD· 1 shared Limin WangiD· 1 shared Peng XuiD· 1 shared

Activity by Year

2018-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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1 shared paperNeuroscience

Christoph W. TurckORCID

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3 papers

Recent·Most cited

Guidance for high-quality functional gene embeddings from large language models

Rongyao Huang, Yaopan Hou, Wuye Zhao, Junbing Zhang, Jian Lu, Yimeng Kong, Peng Xu

This study evaluates gene embeddings from large language models and finds that functional descriptions yield high-quality, biologically meaningful representations.

bioRxiv · May 4, 2026 · PreprintBioinformatics

Naturally occurring Alzheimer's disease in rhesus monkeys

Zhenhui Li, Xiaping He, Shihao Wu, Rongyao Huang, Hao Li, Zhengbo Wang, Limin Wang, Dongdong Qin, Yu Kong, Yingqi Guo, Xia Ma, Christoph W. Turck, Zhi‐Qi Xiong, Wenchao Wang, Xintian Hu

This study identifies naturally occurring Alzheimer's disease in aged rhesus monkeys, showing cognitive impairments and AD pathological hallmarks.

bioRxiv · Oct 20, 2022 · PreprintNeuroscience

De Novo Annotation And Characterization Of The Translatome With Ribosome Profiling Data

Zhengtao Xiao, Rongyao Huang, Xudong Xing, Yuling Chen, Haiteng Deng, Xuerui Yang

This paper introduces RiboCode, a method for de novo translatome annotation using ribosome profiling data, showing improved efficiency, sensitivity, and accuracy in identifying novel ORFs across different yeast stress conditions.

Nucleic Acids Research · Feb 28, 2018Peer-reviewedBioinformatics