Author

S. Alamdari

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 1 Biophysics· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Approach:deep learning· 1 Approach:diffusion model· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Research Focus:protein design· 1 Assay:protein sequence· 1

Frequent Co-Authors

A. Moses· 1 shared A. P. Amini· 1 shared A. X. Lu· 1 shared B. Strome· 1 shared G. Kramer· 1 shared J. Pfaendtner· 1 shared K. Finster· 1 shared K. K. Yang· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioengineering

A. Moses

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Protein generation with evolutionary diffusion: sequence is all you need

S. Alamdari, N. Thakkar, R. van den Berg, N. Tenenholtz, B. Strome, A. Moses, A. X. Lu, N. Fusi, A. P. Amini, K. K. Yang

This paper introduces EvoDiff, a diffusion model that generates diverse, high-fidelity proteins in sequence space, overcoming limitations of structure-based models.

bioRxiv · Sep 11, 2023 · PreprintBioengineering

The Ice Nucleating Protein InaZ is Activated by Low Temperature

S. J. Roeters, T. W. Golbek, M. Bregnhoj, T. Drace, S. Alamdari, W. Roseboom, G. Kramer, T. Santl-Temkiv, K. Finster, S. Woutersen, J. Pfaendtner, T. Boesen, T. Weidner

This study investigates how the ice-nucleating protein InaZ from Pseudomonas syringae folds and interacts with water at low temperatures, revealing structural changes that enhance ice nucleation.

bioRxiv · May 15, 2020 · PreprintBiophysics