Author

S. C. Groen

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 4 Microbiology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Organism:plant (other)· 4 Approach:statistical model· 4 Research Focus:chromatin & epigenetic regulation· 3 Assay:whole-genome sequencing· 3 Assay:bulk RNA-seq· 2 Research Focus:clustering· 2 Organism:Drosophila· 2 Approach:experimental assay· 2

Frequent Co-Authors

A. D. Gloss· 2 shared C. J. Ochoa· 2 shared D. H. Hembry· 2 shared H. C. Suzuki· 2 shared J. L. M. Charboneau· 2 shared K. I. Verster· 2 shared M. D. Purugganan· 2 shared N. K. Whiteman· 2 shared

Activity by Year

2019-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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2 shared papersEvolutionary Biology

A. D. Gloss

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Evolution of chemosensory and detoxification gene families across herbivorous Drosophilidae

J. N. Pelaez, A. D. Gloss, B. Goldman-Huertas, B. Kim, R. T. Lapoint, G. Pimentel-Solorio, K. I. Verster, J. M. Aguilar, A. C. N. Dittrich, M. Singhal, H. C. Suzuki, T. Matsunaga, E. E. Armstrong, J. L. M. Charboneau, S. C. Groen, , N. K. Whiteman

This study examines gene family evolution in herbivorous Drosophila to understand dietary adaptation, finding higher gene turnover in herbivores but limited losses on the ancestral herbivore branch.

G3: Genes, Genomes, Genetics · Jun 15, 2023Peer-reviewedEvolutionary Biology

Evolutionary systems biology reveals patterns of rice adaptation to drought-prone agro-ecosystems

S. C. Groen, Z. Joly-Lopez, A. E. Platts, M. Natividad, Z. Fresquez, W. M. Mauck, M. R. Quintana, C. L. Cabral, R. O. Torres, R. Satija, M. D. Purugganan, A. Henry

This study uses evolutionary systems biology to identify drought-adaptive traits in rice, revealing gene expression modules linked to drought resistance and fitness.

bioRxiv · May 26, 2021Plant Biology

Fitness costs and benefits of gene expression plasticity in rice under drought

S. C. Groen, E. Hamann, I. Calic, C. Cochran, R. Konshok, M. Purugganan, S. J. Franks

This study examines selection on drought-induced gene expression plasticity in rice, finding that housekeeping genes are disfavored to switch off under drought, while selection acts polygenically on co-expressed gene modules.

bioRxiv · Mar 16, 2021 · PreprintEvolutionary Biology

Evolution of herbivory remodels a Drosophila genome

A. D. Gloss, A. C. Nelson Dittrich, R. T. Lapoint, B. Goldman Huertas, K. I. Verster, J. L. Pelaez, A. D. L. Nelson, J. Aguilar, E. Armstrong, J. L. M. Charboneau, S. C. Groen, D. H. Hembry, C. J. Ochoa, T. K. O'Connor, S. Prost, , N. K. Whiteman

This study examines how the evolution of herbivory in Drosophila species reshaped their genome, particularly in genes related to chemical sensing and detoxification.

bioRxiv · Sep 12, 2019 · PreprintEvolutionary Biology

Genomic history and ecology of the geographic spread of rice

R. M. Gutaker, S. C. Groen, E. S. Bellis, J. Y. Choi, I. S. Pires, R. K. Bocinsky, E. R. Slayton, O. Wilkins, C. C. Castillo, S. Negrao, M. M. Oliveira, D. Q. Fuller, J. A. d. Guedes, J. R. Lasky, M. D. Purugganan

The paper reconstructs the ancient dispersal of rice in Asia and identifies extrinsic factors affecting its genomic diversity.

bioRxiv · Aug 31, 2019Evolutionary Biology

The rice leaf microbiome has a conserved community structure controlled by complex host-microbe interactions

V. Roman-reyna, D. Pinili, F. N. Borjaa, I. L. Quibod, S. C. Groen, E. S. Mulyaningsih, A. Rachmat, I. H. Slamet-Loedin, N. Alexandrov, R. Mauleon, R. Oliva

The paper identifies conserved rice leaf microbiome structures influenced by host-microbe interactions and host genomic regions.

bioRxiv · Apr 22, 2019 · PreprintMicrobiology