Author

S. Duncan

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 3 Ecology· 2 Microbiology· 2 Cell Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 6 Research Focus:cell type annotation· 5 Assay:imaging· 3 Assay:metagenomics· 3 Approach:statistical model· 3 Organism:Arabidopsis· 2 Research Focus:ecology & biodiversity· 2 Research Focus:gene regulatory network inference· 2

Frequent Co-Authors

A. Anastasio· 1 shared A. Fonseca· 1 shared A. Hall· 1 shared A. K. Rohr· 1 shared A. Sicard· 1 shared B. Brachi· 1 shared B. Westereng· 1 shared C. Dean· 1 shared

Activity by Year

2018-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 8 mutual co-author links

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1 shared paperPlant Biology

A. Anastasio

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8 papers

Recent·Most cited

Quantitative RNA spatial profiling using single-molecule RNA FISH on plant tissue cryosections

X. Zhang, A. Fonseca, K. Kutashev, A. Sicard, S. Duncan, S. Rosa

This paper introduces an optimized smFISH protocol for plant tissue cryosections, enabling precise quantification of mRNA and validation of scRNA-seq data.

bioRxiv · Apr 9, 2024Cell Biology

Monitoring Lake Okeechobee Harmful Algal Bloom populations and dynamics with a long-duration Autonomous Surface Vehicle

V. Ruiz-Xomchuk, S. Duncan, M. N. McFarland, J. S. Beckler

This paper demonstrates the use of an autonomous drone for continuous monitoring of harmful algal blooms in Lake Okeechobee, detecting blooms early and tracking their spatial dynamics.

bioRxiv · Aug 23, 2023 · PreprintEcology

Data mining and experimental approaches to identify combinations of natural herbs against bacterial infections

E. Mittal, S. Duncan, S. Chamberlin

This study tests the antibacterial efficacy of five herbs and their combinations using experimental assays and computational analysis to identify effective combinations with non-overlapping targets.

bioRxiv · Nov 29, 2022 · PreprintMicrobiology

Plant genetic effects on microbial hubs impact fitness across field trials

B. Brachi, D. Filiault, H. Whitehurst, P. Darme, P. Le Gars, M. Le Mentec, T. C. Morton, E. Kerdaffrec, F. Rabanal, A. Anastasio, M. S. Box, S. Duncan, F. Huang, P. Novikova, M. Perisin, , J. Bergelson

The paper identifies host genetic effects on microbial hubs in Arabidopsis thaliana across field trials, showing their impact on plant fitness and microbial community structure.

bioRxiv · May 11, 2021 · PreprintPlant Biology

Human gut Faecalibacterium prausnitzii deploy a highly efficient conserved system to cross-feed on β-mannan-derived oligosaccharides

L. J. Lindstad, G. Lo, S. A. Leivers, Z. Lu, L. Michalak, G. Vasconcelos Pereira, A. K. Rohr, E. Martens, L. S. McKee, S. Duncan, B. Westereng, P. B. Pope, S. L. La Rosa

This study identifies a conserved system in Faecalibacterium prausnitzii that enables efficient cross-feeding on β-mannan-derived oligosaccharides, enhancing butyrate production in the human gut.

bioRxiv · Dec 23, 2020Microbiology

RNA G-quadruplex structures exist and function in vivo

X. Yang, J. Cheema, Y. Zhang, H. Deng, S. Duncan, M. I. Umar, J. Zhao, Q. Liu, X. Cao, C. K. Kwok, Y. DING

The paper identifies RNA G-quadruplex structures in Arabidopsis and rice, showing they regulate translation and plant growth.

bioRxiv · Nov 12, 2019 · PreprintPlant Biology

A high-throughput delayed fluorescence method reveals underlying differences in the control of circadian rhythms in Triticum aestivum and Brassica napus

H. Rees, S. Duncan, P. Gould, R. Wells, M. Greenwood, T. Brabbs, A. Hall

This study optimizes delayed fluorescence imaging for high-throughput circadian period measurement in wheat and oilseed rape, revealing species-specific differences in circadian robustness.

bioRxiv · Apr 12, 2019Plant Biology

Harmful algae bloom monitoring via a sustainable, sail-powered mobile platform for in-land and coastal monitoring

J. Beckler, E. Arutunian, R. Currier, E. Milbrandt, S. Duncan

The paper introduces a sustainable, sail-powered mobile platform for monitoring harmful algae blooms, demonstrating its ability to collect real-time data and improve satellite monitoring.

bioRxiv · Nov 19, 2018Ecology