Author

S. Katzman

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 2 Cancer Biology· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 3 Research Focus:cell type annotation· 2 Research Focus:host-pathogen & immune response· 2 Organism:human· 2 Organism:mouse· 2 Approach:statistical model· 2 Research Focus:cell signaling & trafficking· 1 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

E. Malekos· 2 shared L. Sudek· 2 shared S. CarpenteriD· 2 shared A. Coleman· 1 shared A. K. Jaiswal· 1 shared B. Paten· 1 shared C. G. Weindel· 1 shared C. J. Mabry· 1 shared

Activity by Year

2018-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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2 shared papersImmunology

E. Malekos

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

CRISPRi screens identify the lncRNA, LOUP, as a multifunctional locus regulating macrophage differentiation epigenetically and inflammatory signaling through a short, encoded peptide

H. Halasz, E. Malekos, S. Covarrubias, S. Yitiz, C. Montano, L. Sudek, S. Katzman, S. J. Liu, M. A. Horlbeck, J. S. Weissman, S. Carpenter

The paper uses CRISPRi screens to identify the lncRNA LOUP as a regulator of macrophage differentiation and inflammatory signaling through epigenetic and peptide-mediated mechanisms.

bioRxiv · Dec 19, 2023 · PreprintImmunology

The RNA binding protein, HNRNPA2B1, regulates IFNG signaling in macrophages

M. Mohammed Salih, C. G. Weindel, E. Malekos, L. Sudek, S. Katzman, C. J. Mabry, A. Coleman, S. Azam, R. O. Watson, K. L. Patrick, S. Carpenter

This study shows HNRNPA2B1 regulates IFNG signaling in macrophages by controlling IFNG receptor splicing and bacterial restriction.

bioRxiv · Oct 12, 2023 · PreprintImmunology

Post-transcriptional gene regulation by the RNA binding protein IGF2BP3 is critical for MLL-AF4 mediated leukemogenesis

T. M. Tran, J. Philipp, J. Bassi, N. Nibber, J. Draper, T. Lin, J. K. Palanichamy, A. K. Jaiswal, O. Silva, M. Paing, J. King, S. Katzman, J. R. Sanford, D. S. Rao

This study identifies IGF2BP3 as a critical regulator of MLL-AF4-driven leukemogenesis, showing its role in enhancing disease progression and identifying it as a potential therapeutic target.

bioRxiv · Dec 20, 2020 · PreprintCancer Biology

KRAB Zinc Finger Proteins coordinate across evolutionary time scales to battle retroelements

J. D. Fernandes, M. Haeussler, J. Armstrong, K. Tigyi, J. Gu, N. Filippi, J. Pierce, T. Thisner, P. Angulo, S. Katzman, B. Paten, D. Haussler, S. Salama

The paper examines the evolutionary arms race between KRAB Zinc Finger Proteins (KZNFs) and retrotransposable elements (RTEs), showing how KZNFs adapt to suppress RTEs over time.

bioRxiv · Sep 27, 2018 · PreprintEvolutionary Biology