Author

S. N. Anderson

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Plant Biology· 5 Evolutionary Biology· 1

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Research Focus:chromatin & epigenetic regulation· 4 Approach:statistical model· 4 Organism:zebrafish· 4 Assay:DNA methylation· 3 Assay:whole-genome sequencing· 3 Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:plant (other)· 2

Frequent Co-Authors

N. M. Springer· 6 shared C. O'Connor· 2 shared J. M. Noshay· 2 shared P. A. Crisp· 2 shared P. Zhou· 2 shared A. Gilbert· 1 shared A. P. Marand· 1 shared C. Hirsch· 1 shared

Activity by Year

2017-2020 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

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6 shared papersPlant Biology

N. M. Springer

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6 papers

Recent·Most cited

Whole Genome Variation of Transposable Element Insertions in a Maize Diversity Panel

Y. Qiu, C. O'Connor, R. Della Coletta, J. S. Renk, P. Monnahan, J. M. Noshay, Z. Lang, A. Gilbert, S. N. Anderson, S. E. McGaugh, N. M. Springer, C. Hirsch

This study analyzes TE insertion polymorphisms across 509 maize inbred lines using short read sequencing, revealing patterns of TE frequency, nesting, and SNP tagging.

bioRxiv · Sep 25, 2020Plant Biology

Genetic and epigenetic contributions to variation in transposable element expression responses to abiotic stress in maize

Z. Liang, S. N. Anderson, J. M. Noshay, P. A. Crisp, T. A. Enders, N. M. Springer

This study examines how genetic and epigenetic factors influence transposable element expression in maize under abiotic stress conditions.

bioRxiv · Aug 26, 2020Plant Biology

Cis-regulatory elements within TEs can influence expression of nearby maize genes

J. Noshay, A. P. Marand, S. N. Anderson, P. Zhou, M. K. Mejia Guerra, Z. Lu, C. O'Connor, P. A. Crisp, C. N. Hirsch, R. J. Schmitz, N. M. Springer

The paper identifies TE insertions that influence gene expression in maize by disrupting or carrying accessible chromatin regions, showing TEs can create novel regulatory elements.

bioRxiv · May 20, 2020 · PreprintPlant Biology

Widespread imprinting of transposable elements and young genes in the maize endosperm

S. N. Anderson, P. Zhou, K. Higgins, Y. Brandvain, N. M. Springer

The paper identifies widespread maternal expression of genes and transposable elements in maize endosperm using whole genome assemblies from reciprocal crosses, revealing imprinted expression patterns and fused transcripts.

bioRxiv · Apr 8, 2020Plant Biology

The Genomic Ecosystem of Transposable Elements in Maize

M. C. Stitzer, S. N. Anderson, N. M. Springer, J. Ross-Ibarra

The paper analyzes the ecological and evolutionary dynamics of transposable element families in maize genomes, revealing diverse strategies and interactions among TE families.

bioRxiv · Feb 28, 2019Evolutionary Biology

Subtle perturbations of the maize methylome reveal genes and transposons silenced by DNA methylation

S. N. Anderson, G. Zynda, J. Song, Z. Han, M. Vaughn, Q. Li, N. M. Springer

The paper identifies genes and transposons affected by context-specific DNA methylation changes in maize mutants, revealing distinct regulatory patterns for CMT and RdDM pathways.

bioRxiv · Nov 21, 2017Plant Biology