Author

Sadik Esener

Oregon Health & Science University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Assay:DNA methylation· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:clustering· 1 Approach:experimental assay· 1 Research Focus:trajectory inference· 1

Frequent Co-Authors

Adriana V.A. Fonseca· 2 shared Akemi D Ramos-Yamasaki· 2 shared Aleksandra Gentry‐MaharajiD· 2 shared Amanda B. Tan· 2 shared Caroline J. WatsoniD· 2 shared Christopher T. BonifaceiD· 2 shared Jamie R. BlundelliD· 2 shared Lars L. P. HansseniD· 2 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Adriana V.A. Fonseca

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

In vivo lineage tracing across human tissues using methylation barcodes in the protocadherin gene cluster

Samuel Hackett, Christopher T. Boniface, Adriana V.A. Fonseca, Akemi D Ramos-Yamasaki, Caroline J. Watson, Hannah M. L.* Bazin, Amanda B. Tan, Henson L. Lee Yu, Lars L. P. Hanssen, Harveer Dev, Sophia Apostolidou, Aleksandra Gentry‐Maharaj, Sadik Esener, Usha Menon, Jamie R. Blundell

The paper uses methylation patterns in the protocadherin gene cluster to track clonal dynamics across human tissues over time, revealing subclonal architectures and cryptic expansions not detectable by standard mutation sequencing.

bioRxiv · Feb 23, 2026 · PreprintGenomics

Methylation dynamics in the decades preceding acute myeloid leukaemia

Adriana V.A. Fonseca, Christopher T. Boniface, Caroline J. Watson, Samuel Hackett, Calum Gabbutt, Akemi D Ramos-Yamasaki, Amanda B. Tan, Jose Montoya, Ruslan Strogantsev, L. E. Hanssen, Y Q Zhang, Sophia Apostolidou, Aleksandra Gentry‐Maharaj, Sadik Esener, Paul T. Spellman, , Jamie R. Blundell

The paper tracks DNA methylation changes in blood samples up to 15 years before AML diagnosis, identifying DMRs linked to clonal expansions and epigenetic reprogramming.

bioRxiv · Jun 26, 2025 · PreprintGenomics

Electro-optical mechanically flexible coaxial microprobes for minimally invasive interfacing with intrinsic neural circuits

Spencer Ward, Conor T. Riley, Erin M. Carey, Jenny Nguyen, Sadik Esener, Axel Nimmerjahn, Donald J. Sirbuly

This paper introduces a minimally invasive coaxial microprobe for multi-modal neural interfacing, enabling efficient electrical and optical interrogation with reduced inflammation.

Nature Communications · Jun 7, 2022Peer-reviewedNeuroscience