Author

Shigeo Otake

Okayama University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 1 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:development & morphogenesis· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:organoid / primary culture· 1

Frequent Co-Authors

Takeshi TakaradaiD· 2 shared Tatsunori Osone· 2 shared Tomoka TakaoiD· 2 shared Hiroomi OkuyamaiD· 1 shared Kazuhiro YamamotoiD· 1 shared Koichi Deguchi· 1 shared Ryosuke IwaiiD· 1 shared Shojiro HanakiiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Takeshi TakaradaORCID

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2 papers

Recent·Most cited

SGCRNA: Spectral Clustering-Guided Co-Expression Network Analysis Without Scale-Free Constraints for Multi-Omic Data

Tatsunori Osone, Tomoka Takao, Shigeo Otake, Takeshi Takarada

SGCRNA improves upon WGCNA by removing scale-free constraints and parameter tuning, offering a more flexible co-expression network analysis for multi-omic data.

Briefings in Bioinformatics · Jan 1, 2026Peer-reviewedBioinformatics

Scaffold-free cryopreservable cartilage grafts obtained from hiPSC-derived chondroprogenitor cells for airway reconstruction with growth adaptability

Shojiro Hanaki, Tomoka Takao, Yuki Fujisawa, Tomoyuki Ota, Tatsunori Osone, Shigeo Otake, Ryosuke Iwai, Koichi Deguchi, Kazuhiro Yamamoto, Hiroomi Okuyama, Takeshi Takarada

This study develops scaffold-free, cryopreservable cartilage grafts from hiPSC-derived cells for tracheal reconstruction, showing growth adaptability and superior performance in animal models.

bioRxiv · Jun 5, 2025 · PreprintBioengineering