Author

Simone Eppmann

TU Dortmund University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:chromatin & epigenetic regulation· 2 Approach:experimental assay· 2 Organism:human· 2 Organism:mouse· 2 Assay:proteomics· 2 Research Focus:cell type annotation· 1 Assay:DNA methylation· 1 Approach:statistical model· 1

Frequent Co-Authors

Daniel SummereriD· 3 shared Lena Engelhard· 2 shared Rasmus LinseriD· 2 shared Zeyneb Vildan CakiliD· 2 shared Benjamin C. BuchmulleriD· 1 shared Chandan Kumar DasiD· 1 shared Himanshu SinghiD· 1 shared Lars V. SchäferiD· 1 shared

Activity by Year

2023-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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3 shared papersBiochemistry

Daniel SummererORCID

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3 papers

Recent·Most cited

Proteomics-Based Discovery of Symmetry-Specific Readers and Antireaders of 5-Formylcytosine in Mammalian DNA

Zeyneb Vildan Cakil, Lena Engelhard, Nina Seidel, Simone Eppmann, Tanja Bange, Daniel Summerer

The paper identifies symmetry-specific readers and anti-readers of 5-formylcytosine (fC) in mammalian DNA using proteomics, revealing how proteins recognize fC-containing CpG dyads with distinct symmetry preferences.

bioRxiv · Apr 12, 2026 · PreprintBiochemistry

Mammalian Proteome Profiling Reveals Readers and Antireaders of Strand-Symmetric and -Asymmetric 5-Hydroxymethylcytosine-Modifications in DNA

Lena Engelhard, Zeyneb Vildan Cakil, Marlon Steven Zambrano-Mila, Simone Eppmann, Tye I. Gonzalez, Rasmus Linser, Petra Janning, Sidney M. Becker, Daniel Summerer

The paper identifies tissue-specific readers and antireaders of symmetric and asymmetric hmC modifications in DNA using proteomics and promoter probe assays in human and mouse cells.

Advanced Science · Jan 4, 2026Peer-reviewedBiochemistry

Epigenetic CpG Duplex Marks Probed by an Evolved DNA Reader via a Well-Tempered Conformational Plasticity

Himanshu Singh, Chandan Kumar Das, Benjamin C. Buchmuller, Simone Eppmann, Lars V. Schäfer, Daniel Summerer, Rasmus Linser

The paper investigates how a designer DNA reader selectively recognizes oxidized CpG duplex marks through conformational plasticity, revealing insights into DNA-protein interactions.

Nucleic Acids Research · Feb 16, 2023Peer-reviewedGenomics