Author

SOO CHING LEE

Howard Hughes Medical Institute

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Adwoa Agyei Nkansah· 1 shared Ai Ing LimiD· 1 shared Aïda Sadikh BadianeiD· 1 shared Ainara SistiagaiD· 1 shared Alain Fezeu· 1 shared Alain FromentiD· 1 shared Alexis ZimmeriD· 1 shared Amelie PlymothiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperMicrobiology

Adwoa Agyei Nkansah

Mutual co-authors in cluster

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2 papers

Recent·Most cited

Lactation Remodels the Maternal Lung to Promote Preemptive Innate Defense

Thomas R. Cafiero, SOO CHING LEE, Chenyan Huang, Krist H Antunes Fernandes, Raju Shivarathri, Dede Setiawan, Harsha Sen, Jessica Ribeiro de Souza, Leafy Ye, Ricardo Mallarino, Fenna M. Krienen, Jigar V. Desai, Ai Ing Lim

This study shows lactation remodels the maternal lung to enhance innate defense against respiratory pathogens through epithelial changes, vascular remodeling, and granulocyte recruitment.

bioRxiv · Oct 8, 2026 · PreprintImmunology

Industrialization drives convergent microbial and physiological shifts in the human metaorganism

Mathilde Poyet, Malte Christoph Rühlemann, Ana Paula Schaan, Yue Ma, Lucas Moitinho‐Silva, Eike Matthias Wacker, Hannah Jebens, Lucas Patel, Le Thanh Tu Nguyen, Alexis Zimmer, Damian Rafal Plichta, Daniel McDonald, Christine R. Stevens, Adwoa Agyei Nkansah, Mary Afihene, , Mathieu Groussin

The paper investigates how industrialization affects microbial and physiological traits in the human gut across diverse populations, finding homogenized microbiomes, reduced diversity, and impaired disease prediction accuracy in less industrialized groups.

bioRxiv · Oct 20, 2025 · PreprintMicrobiology