Author

Sophia Rowlston

National Health Service

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Approach:statistical model· 3 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Assay:Hi-C· 1

Frequent Co-Authors

Frances BurdeniD· 2 shared John J. LambourneiD· 2 shared Kate DownesiD· 2 shared Mattia FrontiniiD· 2 shared Willem Hendrik OuwehandiD· 2 shared Adam FrankishiD· 1 shared Antony J. CutleriD· 1 shared Arcadio Rubio GarcíaiD· 1 shared

Activity by Year

2017-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersGenomics

Frances BurdenORCID

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Author profile →

3 papers

Recent·Most cited

Analysis of Factors Determining Success in FFPE Based NGS Panel Testing For Lung & Ovarian Cancer

P. Bhattacharya, P. Bishop, David A. Gokhale, Sophia Rowlston, B. Eggington, George J. Burghel, Hélene Schlecht

This study identifies pre-analytic factors affecting NGS success in FFPE samples for lung and ovarian cancer, highlighting DNA quality, sample type, and fixation time as key predictors.

medRxiv · Jul 29, 2024 · PreprintGenetic & Genomic Medicine

Cell type specific novel lincRNAs and circRNAs in the BLUEPRINT haematopoietic transcriptomes atlas.

Luigi Grassi, Osagie G. Izuogu, Natasha Andressa Nogueira Jorge, Denis Seyres, Mariona Bustamante, Frances Burden, Samantha Farrow, Neda Farahi, Fergal J. Martin, Adam Frankish, Jonathan M. Mudge, Myrto A. Kostadima, Romina Petersen, John J. Lambourne, Sophia Rowlston, , Mattia Frontini

The paper identifies novel long non-coding RNAs and circular RNAs in hematopoietic cells using BLUEPRINT consortium data, highlighting their cell type specificity.

bioRxiv · Sep 10, 2019 · PreprintGenomics

Chromosome contacts in activated T cells identify autoimmune disease candidate genes

Oliver S. Burren, Arcadio Rubio García, Biola M. Javierre, Daniel B. Rainbow, Jonathan Cairns, Nicholas J. Cooper, John J. Lambourne, Ellen C. Schofield, Xaquín Castro Dopico, Ricardo C. Ferreira, Richard Coulson, Frances Burden, Sophia Rowlston, Kate Downes, Steven Wingett, , Chris Wallace

The paper identifies autoimmune disease candidate genes by integrating promoter capture Hi-C data with genetic associations in activated CD4+ T cells.

Genome biology · Sep 4, 2017Peer-reviewedGenomics