Author

Srikumar Sengupta

Morgridge Institute for Research

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Genomics· 1

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Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Assay:scRNA-seq· 1 Research Focus:spatial domain detection· 1 Approach:statistical model· 1

Frequent Co-Authors

Angela L. Elwell· 1 shared Bret M. DuffiniD· 1 shared Christina M. KendziorskiiD· 1 shared Christina M. Shafer· 1 shared Hadley Browder· 1 shared James Alexander ThomsoniD· 1 shared Jennifer M. BoliniD· 1 shared Kevin Kapadia· 1 shared

Activity by Year

2020-2020 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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1 shared paperGenomics

Angela L. Elwell

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1 paper

Recent·Most cited

Reproducibility across single-cell RNA-seq protocols for spatial ordering analysis

Morten Seirup, Li‐Fang Chu, Srikumar Sengupta, Ning Leng, Hadley Browder, Kevin Kapadia, Christina M. Shafer, Bret M. Duffin, Angela L. Elwell, Jennifer M. Bolin, Scott Allen Swanson, Ron M. Stewart, Christina M. Kendziorski, James Alexander Thomson, Rhonda L. Bacher

This study evaluates the reproducibility of spatial ordering analysis across different single-cell RNA-seq protocols, finding high reproducibility despite differences in sequencing depth and computational methods.

PLoS ONE · Sep 28, 2020Peer-reviewedGenomics