Author

Bret M. Duffin

Morgridge Institute for ResearchORCID 0000-0002-0103-0610Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Assay:scRNA-seq· 1 Research Focus:spatial domain detection· 1 Approach:statistical model· 1

Frequent Co-Authors

Angela L. Elwell· 1 shared Christina M. KendziorskiiD· 1 shared Christina M. Shafer· 1 shared Hadley Browder· 1 shared James Alexander ThomsoniD· 1 shared Jennifer M. BoliniD· 1 shared Kevin Kapadia· 1 shared Li‐Fang ChuiD· 1 shared

Activity by Year

2020-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperGenomics

Angela L. Elwell

Mutual co-authors in cluster

Author profile →

1 paper

Recent·Most cited

Reproducibility across single-cell RNA-seq protocols for spatial ordering analysis

Morten Seirup, Li‐Fang Chu, Srikumar Sengupta, Ning Leng, Hadley Browder, Kevin Kapadia, Christina M. Shafer, Bret M. Duffin, Angela L. Elwell, Jennifer M. Bolin, Scott Allen Swanson, Ron M. Stewart, Christina M. Kendziorski, James Alexander Thomson, Rhonda L. Bacher

This study evaluates the reproducibility of spatial ordering analysis across different single-cell RNA-seq protocols, finding high reproducibility despite differences in sequencing depth and computational methods.

PLoS ONE · Sep 28, 2020Peer-reviewedGenomics