Benchmarking five extracellular vesicle proteomics workflows, including low-input Exo-insert and Exo-SP3, for deep mass spectrometry profiling
Jakub Faktor, Artur Piróg, Anna Biernacka, Ines Papak, Swapnil Bhasvar, Babasaheb P. Sonwane, Tomasz Marjański, Witold Rzyman, Natalia-Marek Trzonkowska, Sachin Kote
The paper benchmarks five proteomics workflows for sEV analysis, showing Exo-insert and Exo-SP3 can identify ~1100 proteins from low-input samples, with performance varying by sEV source.
bioRxiv · May 28, 2026 · PreprintCancer Biology