Author

T. Kayikcioglu

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2

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Research Focus:chromatin & epigenetic regulation· 2 Assay:DNA methylation· 2 Approach:experimental assay· 2 Organism:E. coli· 1 Organism:yeast· 1

Frequent Co-Authors

T. Ha· 2 shared A. Basu· 1 shared A. Ranjan· 1 shared B. Cieza· 1 shared C. Wolberger· 1 shared C.-T. Lin· 1 shared D. G. Bobrovnikov· 1 shared J. A. London· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersBiophysics

T. Ha

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2 papers

Recent·Most cited

Massively parallel single molecule tracking of sequence-dependent DNA mismatch repair in vivo

T. Kayikcioglu, J. S. Zarb, S. Mohapatra, C.-T. Lin, J. A. London, K. D. Hansen, R. Fishel, T. Ha

The paper tracks DNA mismatch repair in E. coli using high-throughput sequencing and finds sequence-dependent repair efficiencies, with CC mismatches being poorly repaired and local context affecting TT, AG, and CT mismatches.

bioRxiv · Jan 8, 2023 · PreprintBiophysics

Measuring DNA mechanics on the genome scale

A. Basu, D. G. Bobrovnikov, Z. Qureshi, T. Kayikcioglu, T. T. Ngo, A. Ranjan, S. Eustermann, B. Cieza, M. Hejna, T. H. Rube, K.-P. Hopfner, C. Wolberger, J. S. Song, T. Ha

This paper develops loop-seq to measure DNA bendability genome-wide and finds sequence-encoded low bendability upstream of TSSs that influences nucleosome positioning and chromatin remodeling.

bioRxiv · Aug 17, 2020Biophysics