Author

T. Koester

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Plant Biology· 4

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Organism:Arabidopsis· 4 Research Focus:cell type annotation· 3 Approach:experimental assay· 3 Assay:bulk RNA-seq· 2 Approach:statistical model· 2 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

D. Staiger· 4 shared A. b. Hur· 1 shared A. Barta· 1 shared A. Jarmolowski· 1 shared A. Matsui· 1 shared A. S. N. Reddy· 1 shared A. Wachter· 1 shared C. P. G. Calixto· 1 shared

Activity by Year

2021-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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4 shared papersPlant Biology

D. Staiger

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4 papers

Recent·Most cited

Revealing the Arabidopsis AtGRP7 mRNA binding proteome by specific enhanced RNA interactome capture

M. Reichel, O. Schmidt, M. Rettel, F. Stein, T. Koester, F. Butter, D. Staiger

The paper identifies proteins interacting with the AtGRP7 mRNA in Arabidopsis using enhanced RNA interactome capture, revealing ALBA proteins as binders.

bioRxiv · Apr 4, 2024 · PreprintPlant Biology

An Arabidopsis SR protein relieving ABA inhibition of seedling establishment represses ABA-responsive alternative splicing

T. Laloum, G. Martin, M. Lewinski, R. J. R. Yanez, T. Koester, D. Staiger, P. Duque

This study identifies SR34a as an Arabidopsis SR protein that regulates alternative splicing to counteract ABA inhibition of seedling establishment.

bioRxiv · Dec 19, 2023 · PreprintPlant Biology

Antagonistic effects of arginine methylation of LSM4 on alternative splicing during plant stress responses

Y. C. Agrofoglio, M. J. Iglesias, S. Perez-Santangelo, M. J. de Leone, T. Koester, R. Catala, J. Salinas, M. J. Yanovsky, D. Staiger, J. L. Mateos

This study shows arginine methylation of LSM4 regulates alternative splicing in Arabidopsis, balancing responses to biotic and abiotic stress.

bioRxiv · Dec 8, 2023 · PreprintPlant Biology

A high resolution single molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis

R. Zhang, R. Kuo, M. Coulter, C. P. G. Calixto, J. C. Entizne, W. Guo, Y. Marquez, L. Milne, S. Riegler, A. Matsui, M. Tanaka, S. Harvey, G. Yubang, T. Wiebner-Kroh, M. Crespi, , J. W. Brown

This paper introduces a new Arabidopsis transcriptome dataset with improved accuracy and resolution using novel Iso-seq analysis methods, enhancing transcript expression and splicing analysis.

bioRxiv · Sep 2, 2021 · PreprintPlant Biology