Author

Tanja Koenen

Max Planck Institute for Multidisciplinary Sciences

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 4 Bioengineering· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 5 Approach:experimental assay· 5 Assay:fluorescence / live-cell microscopy· 3 Organism:human· 3 Assay:imaging· 2 Research Focus:imputation· 2 Organism:mouse· 2 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

Gražvydas LukinavičiusiD· 4 shared Jonas BucevičiusiD· 3 shared Kamila A. KiszkaiD· 2 shared Carola GregoriD· 1 shared Christian DulliniD· 1 shared Dovilė BubnytėiD· 1 shared Ellen Rothermel· 1 shared Frauke AlvesiD· 1 shared

Activity by Year

2025-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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4 shared papersBiochemistry

Gražvydas LukinavičiusORCID

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5 papers

Recent·Most cited

A Highly Selective, Cell-Permeable Fluorescent Probe for Imaging Histone Deacetylase 6 in Live Cells

Văn Thắng Nguyễn, Tanja Koenen, Jonas Bucevičius, Gražvydas Lukinavičius

The paper develops a fluorescent probe for visualizing HDAC6 in live cells, showing high selectivity and utility in imaging its interactions with microtubules and stress granules.

Journal of the American Chemical Society · Jun 9, 2026Peer-reviewedBiochemistry

OptiFoot: a method for recording protein footprints on DNA for microscopy and sequence analysis

Rūta Gerasimaitė, Jonas Bucevičius, Dovilė Bubnytė, Tanja Koenen, Gražvydas Lukinavičius

OptiFoot records protein-nucleic acid interactions using fluorescence and optical mapping, enabling spatial and genomic analysis of DNA and RNA in human cells.

bioRxiv · May 14, 2026 · PreprintBiochemistry

Regioisomer-controlled red-shifted DNA probes for imaging of living tissues

Kamila A. Kiszka, Shalini Pradhan, Jonas Bucevičius, Tanja Koenen, Gražvydas Lukinavičius

The paper develops and evaluates regioisomer-controlled red-shifted DNA probes for in vivo imaging, finding that 5' regioisomers provide optimal performance in multiple tissues.

bioRxiv · Dec 14, 2025 · PreprintBiochemistry

Biocompatible sulfonium-based covalent probes for endogenous tubulin fluorescence nanoscopy in live and fixed cells

Marie Auvray, Tanja Koenen, Olexandr Dybkov, Henning Urlaub, Gražvydas Lukinavičius

The paper develops a biocompatible fluorescent probe for tubulin labeling in live and fixed cells, enabling high-resolution imaging with minimal functional disruption.

Nature Communications · Dec 11, 2025Peer-reviewedBiochemistry

Autonomous bioluminescence emission from transgenic mice

Kamila A. Kiszka, Christian Dullin, Heinz Steffens, Tanja Koenen, Ellen Rothermel, Frauke Alves, Carola Gregor

This paper generates a transgenic mouse line that autonomously emits bioluminescence in vivo without requiring exogenous substrates.

Science Advances · Jul 9, 2025Peer-reviewedBioengineering