Author

Timothé Van Meter

Centre National de la Recherche Scientifique

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2 Genetics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:statistical model· 2 Approach:deep learning· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Deniz DalkaraiD· 3 shared Emilia A. ZiniD· 3 shared Ulisse FerrariiD· 3 shared Jeanne TrinquieriD· 2 shared Maelle Delmas· 2 shared Mélissa DesrosiersiD· 2 shared Muge TekinsoyiD· 2 shared Takahiro NemotoiD· 2 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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3 shared papersBioinformatics

Deniz DalkaraORCID

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Author profile →

3 papers

Recent·Most cited

Viability of engineered AAVs via protein language models

Mélissa Desrosiers, Tommaso Ocari, Jeanne Trinquier, Emilia A. Zin, Timothé Van Meter, Maelle Delmas, Muge Tekinsoy, Arthur Planul, Takahiro Nemoto, Deniz Dalkara, Ulisse Ferrari

The paper uses AI to analyze the structural impact of 7-mer peptide insertions in AAV capsids, identifying viable modifications and their effects on capsid stability and function.

bioRxiv · Jun 11, 2026 · PreprintBioinformatics

Promfusion: a synthetic fusion promoter enabling enhanced and balanced photoreceptor transgene expression

Sophie Tran, Jeanne Trinquier, Timothé Van Meter, Emilia A. Zin, Céline Nanteau, Luisa Riancho, Anaïs Potey, Amélie Slembrouck-Brec, Maelle Delmas, Ulisse Ferrari, Olivier Goureau, Deniz Dalkara

The paper develops and evaluates two synthetic fusion promoters, Pikali and Nocchu, for enhanced and balanced transgene expression in both rods and cones of retinal organoids.

bioRxiv · Jun 9, 2026 · PreprintGenetics

Optimal sequencing depth for measuring the concentrations of molecular barcodes

Tommaso Ocari, Emilia A. Zin, Muge Tekinsoy, Timothé Van Meter, Mélissa Desrosiers, Chiara Cammarota, Deniz Dalkara, Takahiro Nemoto, Ulisse Ferrari

The paper determines the optimal sequencing depth for accurately measuring barcode concentrations in combinatorial genetic experiments by analyzing NGS data and incorporating a mathematical model of PCR amplification.

Nucleic Acids Research · Aug 20, 2025Peer-reviewedBioinformatics