Author

U. Nunes da Rocha

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Ecology· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Assay:metagenomics· 3 Research Focus:ecology & biodiversity· 2 Research Focus:host-pathogen & immune response· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1

Frequent Co-Authors

A. H. C. van Bruggen· 1 shared B. H. Singer· 1 shared B. Liu· 1 shared B. Olivier· 1 shared B. W. Brandt· 1 shared C. Melkonian· 1 shared D. Molenaar· 1 shared E. E. Nuccio· 1 shared

Activity by Year

2019-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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1 shared paperEcology

A. H. C. van Bruggen

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Author profile →

5 papers

Recent·Most cited

Functional redundancy secures resilience of chain elongation communities upon pH shifts in closed bioreactor ecosystems

B. Liu, H. Straeuber, F. Centler, H. Harms, U. Nunes da Rocha, S. Kleinsteuber

The paper investigates how pH changes affect microbial chain elongation communities in bioreactors, finding functional redundancy allows recovery of fermentation functions despite shifts in community composition.

bioRxiv · Nov 12, 2022Microbiology

Stabilising microbial communities by looped mass transfer

S. Li, N. Abdulkadir, F. Schattenberg, U. Nunes da Rocha, V. Grimm, S. Muller, Z. Liu

This study introduces a looped mass transfer system to stabilize microbial communities, showing that it reduces stochastic fluctuations and supports subcommunities with zero net growth.

bioRxiv · Aug 19, 2021 · PreprintMicrobiology

Community RNA-Seq: Multi-kingdom responses to living versus decaying root inputs in soil

E. E. Nuccio, N. H. Nguyen, U. Nunes da Rocha, X. Mayali, J. Bougoure, P. Weber, E. L. Brodie, M. K. Firestone, J. Pett-Ridge

The paper uses community RNA-Seq to analyze multi-kingdom microbial responses to living and decaying root inputs in soil, finding shifts in microbial community composition and substrate preferences.

bioRxiv · Jan 12, 2021 · PreprintMicrobiology

Biodiversity and niche partitioning in an anaerobic benzene degrading culture

C. Melkonian, L. Fillinger, S. Atashgahi, U. Nunes da Rocha, E. Kuiper, B. Olivier, M. Braster, W. Gottstein, R. Helmus, J. Parsons, H. Smidt, M. van der Waals, J. Gerritse, B. W. Brandt, D. Molenaar, R. van Spanning

The paper investigates biodiversity and niche partitioning in a 15-year-old anaerobic benzene-degrading bioreactor, showing that species interactions maintain high diversity through trophic levels.

bioRxiv · Jul 17, 2020Ecology

Potential soil transmission of a novel Candidatus Liberibacter strain detected in citrus seedlings grown in soil from a huanglongbing infested citrus grove

U. Nunes da Rocha, K. Shin, S. Timilsina, J. B. Jones, B. H. Singer, A. H. C. van Bruggen

The paper investigates whether a novel Candidatus Liberibacter strain can be transmitted through soil by testing citrus seedlings in soils from a huanglongbing-infested grove.

bioRxiv · Oct 29, 2019 · PreprintEcology