Author

Vinay S. Mahajan

Every paper listing this name carries an ORCID.

Identified by ORCID

Vinay S. MahajaniD3 papers · Ragon Institute of MGH, MIT and Harvard

Biology Disciplines

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Immunology· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:cell-cell communication· 2 Research Focus:differential expression· 2 Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Approach:experimental assay· 1

Frequent Co-Authors

Shiv S PillaiiD· 3 shared Grace J. YueniD· 2 shared Vinay ViswanadhamiD· 2 shared Alex K. ShalekiD· 1 shared Alice BertocchiiD· 1 shared Alisa A. OmelchenkoiD· 1 shared Alyson WangiD· 1 shared Amanda C. PoholekiD· 1 shared

Activity by Year

2019-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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3 shared papersImmunology

Shiv S PillaiORCID

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3 papers

Recent·Most cited

ImmunologyNature CommunicationsPeer-reviewedJul 22, 2026

A unified network systems approach uncovers a core novel program underlying T follicular helper cell differentiation

Alisa A. Omelchenko, Syed Ashiqur Rahman, Alyson Wang…·Jishnu Das

This study identifies a core gene program underlying Tfh cell differentiation using a multi-scale network systems approach, revealing a novel role for IL-12 in regulating Tfh precursor differentiation.

DOI 10.1038/s41467-026-75559-8

𝕏 PostBluesky

ImmunologyBlood AdvancesPeer-reviewedDec 3, 2024

Congenital T cell activation impairs transitional to follicular B cell maturation in humans

Hugues Allard‐Chamard, Kirsty Hillier, Michelle L. Ramseier…·Shiv S Pillai

Congenital T cell activation in CTLA4-deficient patients impairs transitional to follicular B cell maturation and can be rescued by CTLA4 replacement therapy in vivo.

8 citations

humanflow cytometry

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJan 22, 2019

A Bayesian approach for correcting Tn5 transposition bias in ATAC-seq footprinting

Vinay Viswanadham, Vinay S. Mahajan, Shiv S Pillai

The paper corrects Tn5 transposition bias in ATAC-seq to improve footprinting accuracy by using existing tools and a novel global occupancy estimate.

4 citations

scATAC-seqstatistical model

𝕏 PostBluesky